Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0648 ATGAGAAAACCCACTAAACCCAGAACCACATTCCTCCAATTCCCAATCACAATTCACAGATCCGCCTTCGCTCTCCTCTTCCTCTCAATGGCATCTCTATTCTTCCTGTTATTTTTCTTCTTCAATCTCCACAACCACTCCGCCTTGGAGATCACCCCCCACCAACACAACGTCTGCAATGCCACACGCTTCCCTCTCCAATGCCACTCCACCCTGATCCTTTCCTCCCCATCCTCCAACCCCACCCCCCTCGAAACAATCCAGTTCGCCCTCACCACCTCCTCCTCCAACCTCCTCCTCGCCCGATCCAAAGTGCAGTCCATCGTTGACGCCTCTGCAGGCAACCACACCCGCGCCACCACCGCCAAAAGCTGTCTCCAGGTCCTCCACTACTCCCACCACCGCACCTCCCTCGCCTCCCGCGCCCTCCACCGCGCCGCCACCAAAGACGCCCGCGCCTGGATGAGCGCCTCCCTCGGCTACCAGTATGCCTGCTGGAACGGCCTCACCTACATCAACACCACCTCGCTCGTCGCCTCCACCATAACCTTCCTCGAATCCCTCACCGAACTCTCCAGCAACGCCCTCAGCATGATCGTCTCCTACGACCTCTTCGGAAACGACACCGCTTCCTGGACCCCGCCCGCCACCGAGCGCGACGGCTTCTGGGAGGACCCCTCCTCCGAGACCCACGCACCCGGCATGGGACCCCAGGCGCCGTCTAAGCTCACGCCGGACGTTACGGTCTGTAAGGGGAAGGGCGACGGGTGCTACGGGACGGTGCAGGAAGCGGTTAACGCCGCGCCGGATGACGTGGAAAGTAAGAGGTTTGTGATATATATTAAAGAAGGAGTTTATGAAGAGAAGGTGAGGGTTCCTTTGAGGAAGAAGAATGTGGTGTTCTTGGGAGATGGCATGGGCAAAACCGTCATCACGGGTTCTGCTAACGTGGGCCAGCCCGGAACGACAACATTCAGCTCTGCCACTGTAGGGGTTGCTGGGGATGGATTTATAGCAAAAGATCTCACAATCGAGAACACAGCTGGTCCCAATGCTCACCAAGCAGTGGCCTTCAGATCTGACAGTGATCTTTCTGTGATTGAGAACTGTGAATTCATAGGCAATCAAGATACTCTTTATGCTCATTCCCTGCGCCAGTTTTATAAATCTTGCCGCATAATAGGCAACGTGGATTTCATCTTTGGGAACTCTGCGTCAATCTTCCAAGACTGTGAAATCCTAATCCGGCCCAGGCAAGCCAGACCAAAGAAGGGAGAAAACAATGCAGTTACTGCACAGGGCAGGACAGACCCTGCTCAGTCAACAGGGTTTGTTTTCCAGAACTGTGTGGTTAATGGTACCGAGAAATACATGGAATTGTATTATAGCAATCCTAAAGTTCACAAGAACTATCTGGGGAGGCCATGGAAGGAGTATTCTAGAACAGTTTTCATCCATTCATTCTTAGAAGCCCTTATCACACCAGAGGGCTGGATGCCATGGAGTGGGGATTTTGCACTGAAAACACTTTATTATGGGGAGTTTGAGAACTCAGGACCTGGTTCTAATCGGACTCAGAGGGTGCCCTGGAGTAGCCAGGTCCCAGCCAAGCACTTGTCCTCGTATTCAGCACAGAGTTTCATTCAAGGAGATGATTGGAGTCTTCATCTCGGTCAGTAG 1680 0.5351 MRKPTKPRTTFLQFPITIHRSAFALLFLSMASLFFLLFFFFNLHNHSALEITPHQHNVCNATRFPLQCHSTLILSSPSSNPTPLETIQFALTTSSSNLLLARSKVQSIVDASAGNHTRATTAKSCLQVLHYSHHRTSLASRALHRAATKDARAWMSASLGYQYACWNGLTYINTTSLVASTITFLESLTELSSNALSMIVSYDLFGNDTASWTPPATERDGFWEDPSSETHAPGMGPQAPSKLTPDVTVCKGKGDGCYGTVQEAVNAAPDDVESKRFVIYIKEGVYEEKVRVPLRKKNVVFLGDGMGKTVITGSANVGQPGTTTFSSATVGVAGDGFIAKDLTIENTAGPNAHQAVAFRSDSDLSVIENCEFIGNQDTLYAHSLRQFYKSCRIIGNVDFIFGNSASIFQDCEILIRPRQARPKKGENNAVTAQGRTDPAQSTGFVFQNCVVNGTEKYMELYYSNPKVHKNYLGRPWKEYSRTVFIHSFLEALITPEGWMPWSGDFALKTLYYGEFENSGPGSNRTQRVPWSSQVPAKHLSSYSAQSFIQGDDWSLHLGQ 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0648 559 Pfam Plant invertase/pectin methylesterase inhibitor 56 198 IPR006501 GO:0004857
Aed10g0648 559 CDD PMEI-like_3 58 199 - -
Aed10g0648 559 Gene3D Invertase/pectin methylesterase inhibitor family protein 55 201 IPR035513 -
Aed10g0648 559 TIGRFAM PME_inhib: pectinesterase inhibitor domain 34 199 IPR006501 GO:0004857
Aed10g0648 559 PANTHER PECTINESTERASE 27 555 - -
Aed10g0648 559 SUPERFAMILY Pectin lyase-like 244 554 IPR011050 -
Aed10g0648 559 MobiDBLite consensus disorder prediction 218 244 - -
Aed10g0648 559 Gene3D - 240 557 IPR012334 -
Aed10g0648 559 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 57 199 IPR035513 -
Aed10g0648 559 SMART PMEI_2 50 198 IPR006501 GO:0004857
Aed10g0648 559 Pfam Pectinesterase 246 551 IPR000070 GO:0030599|GO:0042545
Aed10g0648 559 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 27 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0648 Aed-Chr10 5210520 5213636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0648 59 554 Carbohydrate Esterase AT5G09760 64.554 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0648 - - gmx:100802102 872.078
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2114 5 23449119 23452748 Aed10g0648 10 5210520 5213636 PCT