Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0645 ATGAATGTGGTGGCATTGTGTCTGCATGTTTCAGCTTTCTCTCAGAAGAAGATAATCGATTTCTTCGGGATTCGGAGGAGTTCTGATGATGCTAATGACAAGCGTTCTTGTCAGGATGCTAAGAAGCGTAGGAAACGTTCACGACCTCTGGTATTACAAAAGAAAAAGAGGAGACTGTTACCATTTGTTCCTACAAAAGATTCTGCCCAGAGATTGAAACAGATGGGTTCTCTTGCTACTGCTTTAACAGCCTTAAATATAGAATTCATTGATCACCTCACATACTTGCCTGGAATGGCTCCTAGATCTGCGAATCGAGCCACACTTGAAAACGGTGGCATGCAGACTCTTTCCAAGGAAGACATGGAGACTCTAGAACAATGCATTGCAATGTCTAAAAGAGGCGAATTCCCTCCCTTTATGGTTGTTTATGATTCACGTGAAGGCTATACTGTTGAGGCTGATGACCTAATCAAGGATATGACGATTATTGCTGAATACACTGGCGACGTGGATTACCTTGACAAACGAGAATGTGATGACTGTGACAGCATGATGACCCTTCTTCTTGGAGCAGAAAGTTCTCAAAGTCTTGTTATCTGTGCTGATAAACGAGGAAACATTGCTCGCTTTATCAGTGGCATAAATAATCACACACAGGAAGGTAGGAAGAAGCGGAATTGTAAGTGTGTGAGGTACAATGTTAATGGTGAATGCAGGGTCTTTTTAGTTGCTACTCGTGATATTTCTCAGGGAGAGAGGCTATATTATGATTATAATGGTCATGAGTATCAATACCCGACCCACCATTTTGTCTGA 819 0.4188 MNVVALCLHVSAFSQKKIIDFFGIRRSSDDANDKRSCQDAKKRRKRSRPLVLQKKKRRLLPFVPTKDSAQRLKQMGSLATALTALNIEFIDHLTYLPGMAPRSANRATLENGGMQTLSKEDMETLEQCIAMSKRGEFPPFMVVYDSREGYTVEADDLIKDMTIIAEYTGDVDYLDKRECDDCDSMMTLLLGAESSQSLVICADKRGNIARFISGINNHTQEGRKKRNCKCVRYNVNGECRVFLVATRDISQGERLYYDYNGHEYQYPTHHFV 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0645 272 ProSiteProfiles SET domain profile. 138 260 IPR001214 GO:0005515
Aed10g0645 272 CDD SET_ATXR5_6-like 135 272 - -
Aed10g0645 272 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR5 11 270 - -
Aed10g0645 272 SUPERFAMILY SET domain 131 263 IPR046341 -
Aed10g0645 272 Gene3D SET domain 43 272 IPR046341 -
Aed10g0645 272 Pfam SET domain 185 260 IPR001214 GO:0005515
Aed10g0645 272 PANTHER HISTONE ACETYLTRANSFERASE 11 270 - -
Aed10g0645 272 MobiDBLite consensus disorder prediction 28 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0645 Aed-Chr10 5193104 5196297 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aed10g0645 SET 4.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0645 K24406 - gmx:100785817 503.056