Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0640 ATGGAATCGGAATGTGAAGACAAATTGACGAGGGTGGTGGGAGTGGGAGTGGGAAATCAGTGTTATTACCTTTTGAAATCCAAAATCGGAGAGGGTTCATTCTCCGCCGTGTGGAGAGCGGAGCAGAGACCGACCGGTGATGACGTGGCGGTGAAGCAGGTCTTCCTCTCCAAACTCAACCCTCGCCTCAAGGCTTCTTTGGATTGCGAACTCAATTTCTTGTCCTCTGTTAATCACCCTAACATTATTCGCCTTCTTCACTTCTTCCAGGATGATGGATGTGTGTACCTGGTCCTGGAGTTTTGTGCTGGAGGGAATCTAGCTTCTTATATTCAAACCCATGGGAGAGTTCAACAACAAACGGCCAGAAAATTCATGCACCAGCTTGGGTCTGGTCTCAAAGTATTACACTCTCACGGCATTATTCATAGAGACTTAAAACCAGAGGTAAGTCTATTAAGGGCCAAAACTTTGGGAAAACAAGAAAAAAGGGAAAATTGCAGCCCTTTTCCCATAACGGCTCATCCTAGTTGCATGAGAAACCATTCTCTTATTGATAATCTATTGGTAGTGACTATCATTTTGAGACCAGTGGCAAATTTTGTTTTGCTTTGGACTATATGTCCCGGCGAATATGCAGAAACAGTTTGTGGTTCTCCACTATATATGGCTCCAGAAGTAGACATGTGGAGTGTCGGGGCCATTCTTTTCGAGCTTCTAAATGGCTACCCTCCTTTTAATGGCAGAAATAATGTTCAGGTGTTGAGAAACATCAGATCCTGCACTTGTCTCCCATTTTCTCAACTGATTCTTTCAGGATTGGATCCCGACTGTCTTGATATTTGTTCAAGGCTACTATGCTTAAATCCAGTGGAGCGCCTCTCCTTTGATGAATTTTATTGGCATAGCTTTCTACAAAGAAAATTGATGGGAACATGA 939 0.4356 MESECEDKLTRVVGVGVGNQCYYLLKSKIGEGSFSAVWRAEQRPTGDDVAVKQVFLSKLNPRLKASLDCELNFLSSVNHPNIIRLLHFFQDDGCVYLVLEFCAGGNLASYIQTHGRVQQQTARKFMHQLGSGLKVLHSHGIIHRDLKPEVSLLRAKTLGKQEKRENCSPFPITAHPSCMRNHSLIDNLLVVTIILRPVANFVLLWTICPGEYAETVCGSPLYMAPEVDMWSVGAILFELLNGYPPFNGRNNVQVLRNIRSCTCLPFSQLILSGLDPDCLDICSRLLCLNPVERLSFDEFYWHSFLQRKLMGT 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0640 312 SUPERFAMILY Protein kinase-like (PK-like) 22 307 IPR011009 -
Aed10g0640 312 Pfam Protein kinase domain 213 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0640 312 Pfam Protein kinase domain 25 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0640 312 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 21 301 IPR045269 GO:0004674|GO:0006914
Aed10g0640 312 ProSiteProfiles Protein kinase domain profile. 23 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0640 312 Gene3D Transferase(Phosphotransferase) domain 1 185 311 - -
Aed10g0640 312 Gene3D Transferase(Phosphotransferase) domain 1 19 164 - -
Aed10g0640 312 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Aed10g0640 312 PANTHER SERINE/THREONINE-PROTEIN KINASE ATG1T 21 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0640 Aed-Chr10 5142346 5144937 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0640 23 298 CBL-interacting serine-threonine protein kinases AT2G30360 30.450 1.08e-34 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Aed10g0640 Pkinase 5.6e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0640 - - gmx:100787409 476.092