Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0636 ATGATGCTGGAAATCTCAACTTTACCGGAATCCCTCACAGAGAACCCGGAGGAGGGCGGTGGCGCTGCGGCGGTCTCCGACGGGACGAAAGCAGAGCATGGCGAGGACGGTGACCGGAATTCCGTCGCGAACCGATGGCCTCGAGAGGAGACAATGGCTTTGCTCAAAATAAGGTCCGAAATGGACCTTGCTTTCAAAGATACAAACCCCAAAGCCCCTCTCTGGGAACAAGTCTCAAGATTCTTCGACCAATTGGAAGCTTTAGACGGAAACCACTCGCTTCCCCTTCCAATCAACGCGGTTCCGTGTTCGGTGAGTGCGGCGCAGGAGTATGAGCATTCGAGTTCGACGACGTCGTGTTCGGGGTCTAATAATAATAAGAAGCGGAACAAGCTGACGCGGTTTCTGGAGGGGTTGATGAGGGAAGTGATAGAGAAACAAGAGACGCTGCAGAGGAAGTTCATGGAGGTGCTGGACAAGTGCGAGAAGGATCGAATGGAGAGGGAGGAAGCGTGGAAGAAGGAGGAACTCGCCAGGGTTAAGCAAGAACGCGAGCTTCTCGCTCACGAAAGATCAATCGCCGCCGCCAAAGACGAGGCGGTGCTCGCTTTCTTGAGAAAGTTCGCGGAAGCGCAAGGAACGGTGCAGTTGCTGGAGAAAATCCAGGTTCAACAAAATGGTATTACTAATGCTAATGATGATGTGGATGATAAGCAAGAGTGTGGGAATAACAGTGTTAGTGTTGGGAATTTTGTGCACATGAGTTCTTCGCGGTGGCCGAAGGAGGAAGTGGAGGCTTTGATAAGGTTAAGGACGCAGCTTGATGTGCAGGCGATGCAAGGGAATGGGAGTACTAAGGGGCCTCTTTGGGAGGAGATATCTTTGGCAATGAAGGGTGTTGGGTATGATCGAAGTGCTAAGAGGTGTAAAGAGAAATGGGAGAATATAAACAAGTACTTCAAGAGGATGAGGGAGAAGAACAAGAGGAAGCCTCAGGATTCGAAGACGTGTCCTTATTATCACCACCTTGAAGCTTTGTACAGCAAGAAGCCTAAGAAAATGAATGAGAATGAGAATACTACTTCTGGTTCTGGGAACGAGTTGAAGCCTGAGGAGCTGTTGCTGCATATCATGGAGAGTCAAAGTCAAGAAGAGAGACAACAGAAGAAACAGCAGCAGCAGACTCACTCATCATCTGAAGAAGATGGTGAGAGAGAGAACACTGATCAGGATCAGATGGTTGATAATAATAATAATAGTCCTTCTTCCATCGCAATTATGAGTTAG 1287 0.4887 MMLEISTLPESLTENPEEGGGAAAVSDGTKAEHGEDGDRNSVANRWPREETMALLKIRSEMDLAFKDTNPKAPLWEQVSRFFDQLEALDGNHSLPLPINAVPCSVSAAQEYEHSSSTTSCSGSNNNKKRNKLTRFLEGLMREVIEKQETLQRKFMEVLDKCEKDRMEREEAWKKEELARVKQERELLAHERSIAAAKDEAVLAFLRKFAEAQGTVQLLEKIQVQQNGITNANDDVDDKQECGNNSVSVGNFVHMSSSRWPKEEVEALIRLRTQLDVQAMQGNGSTKGPLWEEISLAMKGVGYDRSAKRCKEKWENINKYFKRMREKNKRKPQDSKTCPYYHHLEALYSKKPKKMNENENTTSGSGNELKPEELLLHIMESQSQEERQQKKQQQQTHSSSEEDGERENTDQDQMVDNNNNSPSSIAIMS 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0636 428 Coils Coil 375 395 - -
Aed10g0636 428 MobiDBLite consensus disorder prediction 29 43 - -
Aed10g0636 428 SUPERFAMILY Homeodomain-like 256 336 IPR009057 -
Aed10g0636 428 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-2-LIKE 80 427 - -
Aed10g0636 428 MobiDBLite consensus disorder prediction 1 43 - -
Aed10g0636 428 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-2-LIKE 2 84 - -
Aed10g0636 428 Gene3D - 46 91 - -
Aed10g0636 428 Gene3D - 259 322 - -
Aed10g0636 428 MobiDBLite consensus disorder prediction 372 403 - -
Aed10g0636 428 MobiDBLite consensus disorder prediction 412 428 - -
Aed10g0636 428 PANTHER - 2 84 - -
Aed10g0636 428 PANTHER - 80 427 - -
Aed10g0636 428 SMART sant 255 319 IPR001005 -
Aed10g0636 428 CDD GT1 257 324 - -
Aed10g0636 428 Coils Coil 163 199 - -
Aed10g0636 428 MobiDBLite consensus disorder prediction 348 428 - -
Aed10g0636 428 ProSiteProfiles Myb-like domain profile. 257 317 IPR001005 -
Aed10g0636 428 Pfam Myb/SANT-like DNA-binding domain 257 346 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0636 Aed-Chr10 5117859 5119615 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0636 41 80 Trihelix Transcription Factor Family AT1G76890 70.000 3.72e-12 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Aed10g0636 Myb_DNA-bind_4 4.5e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0636 - - gmx:100805632 593.578