Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0630 ATGAGGGCCCTTCTCCGGAACCACCTCTTGCATTTGTCACGTTCTCCAGCTCGCGCGCTTCTGGTTCGGCTCCAAGCGTGCGAGCTCTCATCTTCTTCTTCTCCCCATAACAACTCCCGAGACGTGATGGTTTTGGTGTGGTGGGATTTCAAGAACTGCACCGTGCCTGATGATGTGAACGCTTCGAAGGTTGCTCCGGCAATCGCACAGGCCGTGAGGACCAATGGGATCAAAGGTCCCATTCATATAACCGCTTTCGGCAACGTTCACATCCTCTCCAAGCCCCACCAGAACGCACTTGCTTCCGCCGGCCCCCAAAATGAGTTGCAGAAATCTTCTCTGGCTAGTGAGAAGGTTGTGGATGTGGCTAATGCACAGCTACCTGAGATTCAACAGCCATCCAAGGAAAACAAAATTTCCAAAACTAAGACAAAATCCCATGAAACTTTTGAGAGAAATGATGTACAATCAATAACGTCTGCTGTTAAGATTGATGAGAGCAATGAAAAGTCTCATGATTTGGCTGCTCATCAGAACAAGGTGGTTAGTCACTTGGAGGATTCTATGTTAACTGAAGTGGACCAGATTGTTGGTGATTTTGAAGAACCCAAGTTATCAGAACTCGACCAGAATAAGCTTGGTTACCAAAAGTTGGCATCCTTGCTACGGATAATGCCAGAAGTTAAAGTAGAGTCACTTATATTCTTCCTTCTATTACTGCTGTTAGTGCTTCTGATGGAGAACCTTGGAACCAATGCCAGTCATGCTCATTCAGTCTTGAACTCAAATAGTGATGAATTATCCAATTCAGCCCCTGAAGATGATAACATGGAATCTCCATGGGAGGAATTAAGTCAGAAAGCTGAAGAACTATATACACCAAAGCTTCCTGATTATGAACCCGTAGTCTCAGATTATGACTCTTCTGAATCTGAAGGAGATTGA 945 0.4508 MRALLRNHLLHLSRSPARALLVRLQACELSSSSSPHNNSRDVMVLVWWDFKNCTVPDDVNASKVAPAIAQAVRTNGIKGPIHITAFGNVHILSKPHQNALASAGPQNELQKSSLASEKVVDVANAQLPEIQQPSKENKISKTKTKSHETFERNDVQSITSAVKIDESNEKSHDLAAHQNKVVSHLEDSMLTEVDQIVGDFEEPKLSELDQNKLGYQKLASLLRIMPEVKVESLIFFLLLLLLVLLMENLGTNASHAHSVLNSNSDELSNSAPEDDNMESPWEELSQKAEELYTPKLPDYEPVVSDYDSSESEGD 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0630 314 Pfam NYN domain 44 127 IPR021139 GO:0004540
Aed10g0630 314 PANTHER EMB|CAB71880.1 200 313 - -
Aed10g0630 314 MobiDBLite consensus disorder prediction 126 152 - -
Aed10g0630 314 MobiDBLite consensus disorder prediction 262 314 - -
Aed10g0630 314 MobiDBLite consensus disorder prediction 136 152 - -
Aed10g0630 314 CDD PIN_limkain_b1_N_like 44 104 - -
Aed10g0630 314 PANTHER EMB|CAB71880.1 10 104 - -
Aed10g0630 314 PANTHER LIMKAIN B LKAP 10 104 IPR024768 GO:0005777|GO:0010468|GO:1903231
Aed10g0630 314 PANTHER LIMKAIN B LKAP 200 313 IPR024768 GO:0005777|GO:0010468|GO:1903231
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0630 Aed-Chr10 5069255 5074869 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0630 46 104 C2H2 Transcription Factor Family AT5G61190 35.593 1.09e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0630 - - gmx:102660946 150.214