Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0613 ATGATGTCAACAACGTCGCAAACTAATGTTAACCATAGTTTGTTTGAAGAGCAAGATCAGATCCCTACGCAGATGGGGTTCAGTAATATTATTCCTTTCCCACCAAACCAAGCCTTCACTCCTTTGGGTTGCCATCAATCTTTGAAATCCATCAGTGCAATAGCTCCTTCATCACTTTCATCTGAACCAGCTTCTGCATTATCTTTTGCTGAAACCCTACTTTCAACCGCTGTTCAAAGGCCAAGAGAAGATCTCACTTCATGTTTGGTAGGAGGAGGAGGAGGCCAACTCCTTTCCTTGAACAGATCGAGATTGAATTCATGGGCATGGGAAGGAGTAGTAAGCGATTGCTTGATGGGTAAGAGAATTGGAGGAGATGAAAATCACCACCATCTAGGGGTTTCTGCAATGAAGATGAAGAAAATGAAGGCAAGGAGAAAGGTGAGGGAGCCAAGGTTTTGCTTCAAGACTATGAGCGAAGTAGATGTGTTGGATGATGGCTACAAGTGGAGGAAGTACGGACAGAAAGTAGTAAAGAACACACAGCACCCAAGAAGCTACTACCGTTGCACCCAAGATAACTGTCGAGTAAAGAAACGCGTGGAACGTTTGGCAGAGGATCCGAGGATGGTGATAACCACATATGAAGGAAGACATGTGCACTCGCCATCTAATGAACTTGAAGACTCACAAACCCATTCTTCTGAGCTTAGTAATTTCTTCTGGTAG 729 0.4403 MMSTTSQTNVNHSLFEEQDQIPTQMGFSNIIPFPPNQAFTPLGCHQSLKSISAIAPSSLSSEPASALSFAETLLSTAVQRPREDLTSCLVGGGGGQLLSLNRSRLNSWAWEGVVSDCLMGKRIGGDENHHHLGVSAMKMKKMKARRKVREPRFCFKTMSEVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHVHSPSNELEDSQTHSSELSNFFW 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0613 242 MobiDBLite consensus disorder prediction 227 242 - -
Aed10g0613 242 SUPERFAMILY WRKY DNA-binding domain 156 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed10g0613 242 Pfam WRKY DNA -binding domain 165 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed10g0613 242 SMART WRKY_cls 164 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed10g0613 242 MobiDBLite consensus disorder prediction 220 242 - -
Aed10g0613 242 ProSiteProfiles WRKY domain profile. 159 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed10g0613 242 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 47 233 IPR044810 GO:0003700
Aed10g0613 242 Gene3D WRKY domain 151 217 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed10g0613 242 PANTHER WRKY TRANSCRIPTION FACTOR 13-RELATED 47 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0613 Aed-Chr10 4908997 4912299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0613 45 242 WRKY Transcription Factor Family AT4G39410 50.000 4.77e-68 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed10g0613 WRKY 1.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0613 - - gmx:100127389 373.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0613 10 4908997 4912299 Aed10g0613 10 4908997 4912299 ECH