Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0589 ATGAATTCCCCACCCAACTTGTTCTTGTTTTTTCTCTTTCTGACTCTACTCTCCGCTTCTTCCTCCACCTCCCTCCCGGAGCTCCGATCTCTCCTCGAATTCAAGAAAGGCATAACCCGAGATCCGGAGAAGCTTCTAGACTCATGGACCTCCGCCGCAGTCGCAGAGTCCGACGCCCCGTGTCCTACCTCCTGGCAGGGGCTCGTCTGCGACGAGGAGTCCGGGAACGTCACCGGAATCGTCCTCGACCGCCTCAACCTCGGCGGCGAGCTCAAGTTCCACACTCTCCTCGACCTGAAGATGCTGAGAAACCTCTCTCTCTCCGGCAACGACTTCACCGGGCGCCTACCTCCCTCCCTGGGCTCACTCTCCTCGCTCCAGCATTTGGATCTTTCGCATAACAAGTTCTACGGACCCATCCCGGCGCGGATCAACGACCTCTGGGGTCTCAATTACCTCAATTTGTCAAACAACAGGTTCAAGGGCGGCTTCCCCAGCGGCCTCAGCAACCTTCAGCAGCTCCGCGTTCTCGATTTGCATGCAAATGAACTCTGGGCCCAAATTGGGGACGTGCTCTCCACGCTCCGCAACGTGGAGCGCGTGGATTTGAGCCTTAACCAGTTCTTCGGCGGACTCTCCCTCCCGGTGGAGAATGTTTCCGGCTTGGCCAACACCGTGCATTTTCTTAACTTGAGTCACAACAACTTGAACGGTCCTTTCTTTACAAACTCCACCATTGGCCTCTTTCGCAACTTGCAGGTTTTGGACTTGAGTAACAACTCTGTCACTGGGGAGCTTCCTTCTTTTGTCTCCTTGCCCGCCCTTCGCGTTCTACGCCTTCCCCGGAATCAATTGTTTGGCTCCGTGCCGGAGGAGCTGTTGCAGTCTTCTACAGTGCAGCTGGAAGAATTGGATCTTAGCGTCAATGGCTTTACTGGCTCAATTGGTGTGATCAACTCTACAACATTAAATATTTTGAATCTTTCAACCAATAGTTTATCAGGCTCCTTACCAACTTCTTTGAGAAGATGTACGGTCATTGACTTGAGCAAGAATATGTTATCTGGTGACATTTCTGTCATACAGAACTGGGAGGCCCCATTGGAGGTCATTGTTCTGAGTTCAAACAAGCTGTCAGGATCCTTGCCATCTATTTTAGAAACCTATTCAAAATTGTCTACTGTCGACTTAAGTTTAAATGAACTTAAGGGATCCATTCCACGAGGTTTAGTTACATCATCGTCAGTGGCAAGACTAAACCTTTCTGGAAATCAATTTACAGGGCCACTTCTGCTTCAAGGTTCAGGAGCAAGTGAATTGCTACTTATGCCTCCTTATCAACCAATGGAATATCTTGATGCATCTAATAACTCATTAGAAGGTGCCTTGCCTTCTGAAATAGGTAGGATGGGTGTGCTCAAACTGCTGAATCTGGCAAGGAATGGCTTTTCTGGACAGCTGCCAAATGAATTGAGCAAACTTAATTATTTGGAGTACCTTGATTTGTCTAACAACAAATTTACTGGAAATATTCCCGATAAGCTTTCATCCAGCTTAACTGTATTTAATGTGTCCAATAATGATCTATCTGGTCGTGTTCCTGAAAATTTGCGGCAGTTCTCTCCTTCATCCTTTCACCCTGGAAATGGAAAGCTAATGTTACCGAATGATTCTCCTGAGACTTCTTCAGTGCCTGATAACATTCCAGATAAGGGTAGGCATCATAGTTCAAAGGGTAATATCAGGATAGCAATTATTCTTGCCTCAGTGGGTGCTGCTATTATGATTGCTTTTGTTTTATTGGCTTATCATCGAACACAATTAAAAGAGTTTCATGGAAGAAGTGGGTTCACTGGCCAAACTACTAGAAGAGATGTCAAGTTAGGAGGACTTCCAGGGTCTTCCCTCTTCAAGTTCAATACAAATGTTCAACCTCCAACATCTTCATTGAGCTTTTCAAATGATCACCTGTTGACTTCCAATTCAAGGTCACTCTCTGGTGGACAGTCAGAGTTTATAACTGAAATTTCTGAGCATGGCTTAACTCAGGGAATGGTGGCTACTAGTTCAGCATCTGTAAATCCTAATTTGATGGATAACCCTCCCACTTCATCTGGAAGGAAGTCTTCTCCTGGTTCCCCAATGTCATCCTCACCCCGTTTTATAGAGGCTTGTGAAAAGCCAGTGATGTTGGATGTTTACTCACCAGATCGGTTGGCTGGGGAACTGTTTTTCCTGGATTCTCCCCTAGCATTCAGTGCAGAGGAATTATCACGAGCTCCAGCTGAAGTTCTTGGCAGAAGTAGCCATGGCACTTTATACAAAGCAACTCTGGACAGTGGTCATATGTTGACTGTAAAATGGTTACGGGTGGGATTGGTTAAACATAAAAAGGAATTTGCTAGAGAAGTTAAAAGGATTGGTTCTATGAGGCATCCAAACATTGTCCCATTACTAGCATACTATTGGGGGCCTAGGGAACAAGAGAGGCTTCTTTTAGCTGACTATATACATGGGGACAACTTGGCTCTTCATCTCTATGAGAGCACACCCCGGAGGTACTCCCCATTATCATTCAGCCAGAGAATAAGAGTTGCTGTTGATGTTGCTCGATGTCTTCTATACCTTCATGATCGAGGACTTCCCCATGGAAATCTAAAGCCAACAAATATAGTGTTAGCAGGTCCTGATTTCAGTGCTCGTCTTACTGACTATGGTCTGCACCGGTTGATGACACCGGCTGGAATTGCAGAGCAGATACTAAATCTCGGAGCACTTGGATACCGTCCTCCAGAACTTGCTACTGCATCGAAGCCAGTTCCATCCTTTAAGGCTGATGTGTATGCACTTGGTGTGATTCTAATGGAATTGTTAACAAGAAAAAGTGCAGGTGACATAATATCAGGGCAATCAGGTGCTGTTGATCTTACAGATTGGGTTAGGCTGTGCGAGCGAGAAGGAAGGGTAATGGATTGTATTGACAGAGACATTGCAGGTGGGGAAGAATCCTCGAAGGAGATGGATGAACTGCTTGCAATATCTCTCAGGTGTATTCTCCCTGTAAATGAGAGGCCTAACATCAGACAAGTTTTTGACGATCTGTGTTCAATATCGGTTTGA 3120 0.4606 MNSPPNLFLFFLFLTLLSASSSTSLPELRSLLEFKKGITRDPEKLLDSWTSAAVAESDAPCPTSWQGLVCDEESGNVTGIVLDRLNLGGELKFHTLLDLKMLRNLSLSGNDFTGRLPPSLGSLSSLQHLDLSHNKFYGPIPARINDLWGLNYLNLSNNRFKGGFPSGLSNLQQLRVLDLHANELWAQIGDVLSTLRNVERVDLSLNQFFGGLSLPVENVSGLANTVHFLNLSHNNLNGPFFTNSTIGLFRNLQVLDLSNNSVTGELPSFVSLPALRVLRLPRNQLFGSVPEELLQSSTVQLEELDLSVNGFTGSIGVINSTTLNILNLSTNSLSGSLPTSLRRCTVIDLSKNMLSGDISVIQNWEAPLEVIVLSSNKLSGSLPSILETYSKLSTVDLSLNELKGSIPRGLVTSSSVARLNLSGNQFTGPLLLQGSGASELLLMPPYQPMEYLDASNNSLEGALPSEIGRMGVLKLLNLARNGFSGQLPNELSKLNYLEYLDLSNNKFTGNIPDKLSSSLTVFNVSNNDLSGRVPENLRQFSPSSFHPGNGKLMLPNDSPETSSVPDNIPDKGRHHSSKGNIRIAIILASVGAAIMIAFVLLAYHRTQLKEFHGRSGFTGQTTRRDVKLGGLPGSSLFKFNTNVQPPTSSLSFSNDHLLTSNSRSLSGGQSEFITEISEHGLTQGMVATSSASVNPNLMDNPPTSSGRKSSPGSPMSSSPRFIEACEKPVMLDVYSPDRLAGELFFLDSPLAFSAEELSRAPAEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVKHKKEFAREVKRIGSMRHPNIVPLLAYYWGPREQERLLLADYIHGDNLALHLYESTPRRYSPLSFSQRIRVAVDVARCLLYLHDRGLPHGNLKPTNIVLAGPDFSARLTDYGLHRLMTPAGIAEQILNLGALGYRPPELATASKPVPSFKADVYALGVILMELLTRKSAGDIISGQSGAVDLTDWVRLCEREGRVMDCIDRDIAGGEESSKEMDELLAISLRCILPVNERPNIRQVFDDLCSISV 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0589 1039 SUPERFAMILY Protein kinase-like (PK-like) 762 1034 IPR011009 -
Aed10g0589 1039 Pfam Leucine rich repeat N-terminal domain 26 71 IPR013210 -
Aed10g0589 1039 ProSiteProfiles Leucine-rich repeat profile. 251 273 IPR001611 GO:0005515
Aed10g0589 1039 MobiDBLite consensus disorder prediction 691 717 - -
Aed10g0589 1039 SMART LRR_typ_2 249 271 IPR003591 -
Aed10g0589 1039 SMART LRR_typ_2 171 195 IPR003591 -
Aed10g0589 1039 SMART LRR_typ_2 494 518 IPR003591 -
Aed10g0589 1039 SMART LRR_typ_2 272 296 IPR003591 -
Aed10g0589 1039 SMART LRR_typ_2 123 147 IPR003591 -
Aed10g0589 1039 SUPERFAMILY RNI-like 104 529 - -
Aed10g0589 1039 Gene3D Ribonuclease Inhibitor 219 562 IPR032675 -
Aed10g0589 1039 MobiDBLite consensus disorder prediction 541 575 - -
Aed10g0589 1039 PANTHER OS07G0626500 PROTEIN 7 1036 - -
Aed10g0589 1039 PANTHER OS07G0626500 PROTEIN 7 1036 - -
Aed10g0589 1039 MobiDBLite consensus disorder prediction 691 719 - -
Aed10g0589 1039 ProSiteProfiles Protein kinase domain profile. 759 1039 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0589 1039 Pfam Leucine Rich Repeat 251 268 IPR001611 GO:0005515
Aed10g0589 1039 Gene3D Transferase(Phosphotransferase) domain 1 838 1039 - -
Aed10g0589 1039 Pfam Protein kinase domain 763 1030 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0589 1039 Gene3D Phosphorylase Kinase; domain 1 744 836 - -
Aed10g0589 1039 Gene3D Ribonuclease Inhibitor 26 218 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0589 Aed-Chr10 4742626 4748852 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0589 9 534 Receptor kinase-like Gene Family AT5G01890 33.865 1.55e-59 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aed10g0589 Pkinase 6e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0589 - - gmx:100802768 1832.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0589 10 4742626 4748852 Aed10g0589 10 4742626 4748852 ECH