Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0585 ATGGGAACCGTTAGTAACATTGGCTTCTCTTCAGTATTCAGAGTTCATCTAGATTCACAAGTAGTACTTTCAAAGCAGATAAAGATTAAATCTTGGTGCCGTTTTATGGTTCCTCCTTATCATAATAACTACTCTGTTAGGCTGAGTCCAATATGTTGCAAGCTATCAGAAAGTGGGATTGAGGAGAAGAACCCCACAAGCACGAGCAAGAGGCCCTCTAAGACCAAAGACAGAATGGAAGACTACAATATAGCTATGAAGAGAATGATGAGGAACCCTTTTGAGTATCATCATGATCTGGGTATGAATTACACTCTTATAATGGACAACTTGATTGTGGGCTCACAACCACAGAAACCCGAAGACATAGATCACCTCAGAAAGGAAGAGGGTGTGGAATACATTCTAAACTTGCAACAGGATAAGGATGTTGAGTTTTGGGGAATAGACTTGCAGTCAATAAAAAAAGGTGCCATGAACTTGAAATTAGCCACACGAGGAGACCGTACATCTGTACATAAGTATTTATATCATGCAGAAGACGTCTTGGCAAAAGACTTTGATCCAGATTCCTTGCGAAATGAACTACCTAAAGCAGTCTCATCTTTAGAATGGGCAATTTCTGAGGGAAAAGGAAGAGTTTATGTGCATTGTACTGCTGGACTTGGAAGAGCTCCAGCAGTGGCAATTGCTTATTTGTTCTGGTTTTGTGACATGAATCTAAATGAAGCATATGATATGCTAACCTCAAAGAGACCTTGTGGACCAAATAAAAGAGCAATACGTGGAGCTACTTATGATTTGGCTAAGAATGATCCATGGAAGGAGCCATTTGAGAATCTTCCAGAATATGCATTTGAGGACATAGCAGATTGGGAAAGGAACTTGATTCAAGATGGTGTCCGGTCCCTTCGAGGAACTTGA 924 0.4048 MGTVSNIGFSSVFRVHLDSQVVLSKQIKIKSWCRFMVPPYHNNYSVRLSPICCKLSESGIEEKNPTSTSKRPSKTKDRMEDYNIAMKRMMRNPFEYHHDLGMNYTLIMDNLIVGSQPQKPEDIDHLRKEEGVEYILNLQQDKDVEFWGIDLQSIKKGAMNLKLATRGDRTSVHKYLYHAEDVLAKDFDPDSLRNELPKAVSSLEWAISEGKGRVYVHCTAGLGRAPAVAIAYLFWFCDMNLNEAYDMLTSKRPCGPNKRAIRGATYDLAKNDPWKEPFENLPEYAFEDIADWERNLIQDGVRSLRGT 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0585 307 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF2, CHLOROPLASTIC 2 307 - -
Aed10g0585 307 ProSiteProfiles Dual specificity protein phosphatase domain profile. 103 274 IPR020422 GO:0006470|GO:0008138
Aed10g0585 307 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 194 253 IPR000387 GO:0016311|GO:0016791
Aed10g0585 307 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 2 307 - -
Aed10g0585 307 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 100 259 IPR029021 -
Aed10g0585 307 Gene3D Protein tyrosine phosphatase superfamily 86 307 IPR029021 -
Aed10g0585 307 SMART dsp_5 103 267 IPR020422 GO:0006470|GO:0008138
Aed10g0585 307 CDD DSP_laforin-like 102 263 IPR045204 GO:0019203|GO:0046838
Aed10g0585 307 Pfam Dual specificity phosphatase, catalytic domain 171 257 IPR000340 GO:0008138|GO:0016311
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0585 Aed-Chr10 4691319 4694292 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0585 48 307 Protein tyrosine phosphatase (PTP) family AT3G10940 68.462 1.08e-126 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0585 - - gmx:100805592 492.656