Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0571 ATGGCAGTTGTAGCAACCTCTCTTCTCTTCTTTCTTCTTAATTTATGCCTTAGAGGCACTTTCGGTGACTATGGAGGAGGGGCTTGTGGTTATGGAAATTTGTACAGCCAAGGGTATGGCACAAACACTGCAGCACTGAGCACTGCTCTATTCAACAATGGGTTGAGTTGCGGGTCTTGCTATGAGATGAAATGTGACAGTGACCCAAAATGGTGCCTCCCCGGTAGCATAATCGTAACCGCCACAAACTTCTGCCCCCCTAACCTTGCATTGGCTAACAACAATGGTGGCTGGTGCAACCCTCCTTTGCAACACTTTGATCTTGCTGAGCCTGCTTTCTTACAAATTGCTCAATACAGAGCTGGAATTGTCCCTGTTTCCTTCAGAAGAGTCTCTTGTGTGAAGAAAGGAGGGATCAGGTTCACCATCAATGGCCACTCTTACTTCAACTTGGTTCTGGTGACAAATGTTGGTGGAGCTGGAGATGTTCATTCTGTGTCCATCAAAGGGTCTAGGACTGGGTGGCAAACCATGTCTAGAAACTGGGGGCAGAATTGGCAAAGCAACTCTTACCTAAATGGCCAAAGCCTCTCTTTTCAGGTCACTACAAGTGATGGCAGAACCATCACTAGCAACAACATTGTGCCTGGTAGCTGGCAATTTGGCCAAACATTTGAAGGGGCACAGTTCTAG 693 0.4704 MAVVATSLLFFLLNLCLRGTFGDYGGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEMKCDSDPKWCLPGSIIVTATNFCPPNLALANNNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVSCVKKGGIRFTINGHSYFNLVLVTNVGGAGDVHSVSIKGSRTGWQTMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTITSNNIVPGSWQFGQTFEGAQF 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0571 230 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 26 138 IPR007112 -
Aed10g0571 230 Pfam Expansin C-terminal domain 139 216 IPR007117 -
Aed10g0571 230 Gene3D - 18 133 IPR036908 -
Aed10g0571 230 PANTHER EXPANSIN-A15 26 230 IPR002963 GO:0009664
Aed10g0571 230 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 148 227 IPR007117 -
Aed10g0571 230 PANTHER EXPANSIN 26 230 - -
Aed10g0571 230 Gene3D - 137 230 IPR036749 -
Aed10g0571 230 PRINTS Expansin/Lol pI family signature 213 227 IPR007118 GO:0005576
Aed10g0571 230 PRINTS Expansin/Lol pI family signature 47 65 IPR007118 GO:0005576
Aed10g0571 230 PRINTS Expansin/Lol pI family signature 121 137 IPR007118 GO:0005576
Aed10g0571 230 PRINTS Expansin/Lol pI family signature 175 189 IPR007118 GO:0005576
Aed10g0571 230 PRINTS Expansin/Lol pI family signature 25 43 IPR007118 GO:0005576
Aed10g0571 230 PRINTS Expansin signature 149 170 IPR002963 GO:0009664
Aed10g0571 230 PRINTS Expansin signature 213 229 IPR002963 GO:0009664
Aed10g0571 230 PRINTS Expansin signature 65 76 IPR002963 GO:0009664
Aed10g0571 230 PRINTS Expansin signature 137 149 IPR002963 GO:0009664
Aed10g0571 230 PRINTS Expansin signature 77 87 IPR002963 GO:0009664
Aed10g0571 230 PRINTS Expansin signature 38 52 IPR002963 GO:0009664
Aed10g0571 230 PRINTS Expansin signature 113 126 IPR002963 GO:0009664
Aed10g0571 230 PRINTS Expansin signature 96 113 IPR002963 GO:0009664
Aed10g0571 230 PRINTS Expansin signature 184 205 IPR002963 GO:0009664
Aed10g0571 230 SUPERFAMILY Barwin-like endoglucanases 20 156 IPR036908 -
Aed10g0571 230 SUPERFAMILY PHL pollen allergen 135 227 IPR036749 -
Aed10g0571 230 SMART dpbb_1 43 128 IPR007112 -
Aed10g0571 230 Pfam Lytic transglycolase 43 128 IPR009009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0571 Aed-Chr10 4581297 4582838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0571 7 230 Expansin Gene Family AT2G40610 73.361 3.41e-131 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0571 - K20628 gmx:547673 443.351