Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0570 ATGGAAGAGGTGATGTGGTTCAGATTTCTACGTCATGGGCCAGTCCCACACCTTCACAATTTGTTCCTTCTCATCATTCTCAGAGAGTGCCACGTGTCCCTTGGGATTGACTTTACCCCATACACAAACGACGCCGTTCGGAGTGTCTCCCTTAAAGGCAGAGAGACCGCGCGAGTGAGACCAGAGAGGGGAGGGAAACGGAGCAGTGACCGGTTCAAACCCGTCGCCACCGGAACAACCCCCATTCCGGTCACTCTCATTCCCCCAATCCAAAAAACGATGTCGTTTCCTCAACACCGTCGATCTCAATCGGAGATGCATTTCCGGATCACCGACGACTTCGACCTCGAAGTGGATCTCTCTCCGCCGCATCATTTCCAAGATCCCACCCCGCTCGAAGATTCCGAATCCATACCCCAATCTCCGCAACCCGACACCGACGACCCCGATCACCGCCGTAGCAATTCCGCCGACGCCTCTTCTTCCTCTCTATTGGAAGGCATTGAGGCCAAAAAAGCCTTGTCCCCCGATAAGCTCGCTGAATTGTGGACCGTTGATCCCAAACGAGCCAAGAGGATTCTGGCTAACCGTCAATCCGCGGCACGCTCTAAAGAGAGGAAGGCTTGTTACGTGACGGAGCTTGAAAGAAAATTTCAATCTCTTCAAACGGAAGCAACCGCTCTTTCTGCTCAACTAAATCTCTTCCAGAGAGATACAACGGGTCTGACTACAGAAAATACGGATTTGAAGTTTAGGTTACAAGCCATGGAACGACAAGCTAACTTATGTGATGCTCTAAATGATGCACTGAAGAAAGAAGTTGATAGGCTCAGGATGGCAACTGGAGATATAGTAATGCATTCCGATACCTACGGTTTGGGAATGCATCCACTTACATATTCTCACACTCCGTTCTTCTCACATCAGTCACAACATGGACAGAGTGAACTTCAGGCCATGCAAATGCCGCAGCTACATCCACTTTCATCTAATGTGTTTACTTCCCATGAGCCTCTGTTTGATCTGGACATTCCCTATGATTTGTCAGAAATGTTGTCAAGTGAATCTATCGGCCAATTTCAGGGGCTGGACATAGGCCACGGGGTTTCTCATAATCTGATGCAAGATTGTCCCTCCATTCCTGTTAATAAAATCAACAATTCTTTTTTATGCAAATTTGACTGA 1185 0.4835 MEEVMWFRFLRHGPVPHLHNLFLLIILRECHVSLGIDFTPYTNDAVRSVSLKGRETARVRPERGGKRSSDRFKPVATGTTPIPVTLIPPIQKTMSFPQHRRSQSEMHFRITDDFDLEVDLSPPHHFQDPTPLEDSESIPQSPQPDTDDPDHRRSNSADASSSSLLEGIEAKKALSPDKLAELWTVDPKRAKRILANRQSAARSKERKACYVTELERKFQSLQTEATALSAQLNLFQRDTTGLTTENTDLKFRLQAMERQANLCDALNDALKKEVDRLRMATGDIVMHSDTYGLGMHPLTYSHTPFFSHQSQHGQSELQAMQMPQLHPLSSNVFTSHEPLFDLDIPYDLSEMLSSESIGQFQGLDIGHGVSHNLMQDCPSIPVNKINNSFLCKFD 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0570 394 Gene3D - 187 239 - -
Aed10g0570 394 PANTHER BZIP TRANSCRIPTION FACTOR 18 146 385 - -
Aed10g0570 394 PANTHER BZIP TRANSCRIPTION FACTOR 18 91 134 - -
Aed10g0570 394 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 146 385 - -
Aed10g0570 394 CDD bZIP_plant_RF2 189 238 IPR044759 GO:0003700|GO:0006355
Aed10g0570 394 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 91 134 - -
Aed10g0570 394 MobiDBLite consensus disorder prediction 119 164 - -
Aed10g0570 394 Coils Coil 211 231 - -
Aed10g0570 394 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 186 249 IPR004827 GO:0003700|GO:0006355
Aed10g0570 394 MobiDBLite consensus disorder prediction 55 84 - -
Aed10g0570 394 SMART brlzneu 184 248 IPR004827 GO:0003700|GO:0006355
Aed10g0570 394 Pfam bZIP transcription factor 188 241 IPR004827 GO:0003700|GO:0006355
Aed10g0570 394 Coils Coil 253 273 - -
Aed10g0570 394 SUPERFAMILY Leucine zipper domain 188 242 IPR046347 GO:0003700|GO:0006355
Aed10g0570 394 MobiDBLite consensus disorder prediction 55 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0570 Aed-Chr10 4569354 4574803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0570 74 365 bZIP Transcription Factor Family AT2G40620 43.605 5.56e-69 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aed10g0570 bZIP_1 6.3e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0570 - - gmx:100807712 471.47