Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0563 ATGGCTGCAGCAGCTTCTTCTTCTTCTTCTTCTTCAAATTGGGTCATGGAAACTGCTGATGTTCCTCATGTTTTGGCCGTTGATGACAACCTTATTGATCGCAAACTCGTTGAGAAACTCCTCAGAAATTCTTCTTGCAAAGTCACCACTGCAGAAAATGGGCCAAGGGCATTGGAGTTATTGGGCTTGACAAGTGGTGGAAATAACACGATGAACGGTAGATCCAAAGTAAATATGGTAATCACAGACTATTGCATGCCAGGGATGACAGGCTACGAGCTACTTAAGAAAATTAAGGAATCATCTGTAATGAAGGAGGTTCCAGTAGTGATCATGTCATCTGAGAACATACCAACACGGATTAACAAGTGTCTGGAAGAAGGAGCTCAGATGTTCATGCTAAAGCCACTCAAACAATCTGATAGTCTAAGTAGGCAATATGGCAGCAACACTATGATGATAGCAGCACTCCAGAACCCTGCATTTGTCATGGCCGTGTCTATTGCTAAAATCTATAATATATAG 525 0.419 MAAAASSSSSSSNWVMETADVPHVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALELLGLTSGGNNTMNGRSKVNMVITDYCMPGMTGYELLKKIKESSVMKEVPVVIMSSENIPTRINKCLEEGAQMFMLKPLKQSDSLSRQYGSNTMMIAALQNPAFVMAVSIAKIYNI 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0563 174 ProSiteProfiles Response regulatory domain profile. 23 150 IPR001789 GO:0000160
Aed10g0563 174 Gene3D - 23 159 - -
Aed10g0563 174 PANTHER TWO-COMPONENT RESPONSE REGULATOR 11 142 IPR045279 GO:0009736
Aed10g0563 174 Pfam Response regulator receiver domain 24 141 IPR001789 GO:0000160
Aed10g0563 174 SMART REC_2 22 146 IPR001789 GO:0000160
Aed10g0563 174 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR17-LIKE 11 142 - -
Aed10g0563 174 CDD REC_typeA_ARR 24 141 - -
Aed10g0563 174 SUPERFAMILY CheY-like 22 139 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0563 Aed-Chr10 4512763 4514077 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0563 23 141 Response Regulator Gene Family AT3G56380 74.380 4.32e-58 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aed10g0563 Response_reg 4.8e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0563 K14492 - gmx:100499827 256.529