Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0561 ATGGAAGAGGTAATAAATTCGATTCGACGCGCTTGCAATCTCGCCCAAAACCTTGAACACGACCTACCCAACTTGGCCAACCAGCAGCCAGCTATGCTGTCCTTGTCTATTGATCAGATCACTGAGGCTTTCGGTGCTGCCAAGGAAAAGATGTTGCTATTTTCCCGACAGAACCTAACTACCTCGGACTCTCCTCCTCCTCCAACGTTGGTTCATGAAACTACGGCGATGCCGGTGCAGTCTCAGATGGATGCTACTCTAATGCAGGAATGGCTAAGGTCTAGTCATGCACTGACAATGGATCAGTTGTTTCAAATGCATCAGTTCCAAACTGCAAGGAGCACTCTCGGAGGGGGAGATCATGGGGAAGATTCTGATCAGAGAAACATGGGATCTGAAGGGGAAATGCAAGGAATACACGCATCACCCTCGCGACCAAGACGAAGAAGCAGTAGGGAAGGTGCTAGTCAAGAGAAGAGAAAGGTTACGGTTCCTGCTCCACAGTTTGGAAACACGGATATGCCACCGGAGGATGGCTTCACTTGGAGGAAATATGGCCAGAAAGAAATACTTGGCTCCAAGTACCCTAGGAGTTACTACAGGTGCACACACCAAAAGCTATACGAGTGCCAAGCCAAGAAGCAAGTGCAAAGACTTGATCACAACCCTAACATATTCGAAGTAACATACAGAGGAAACCACACGTGCCACATGTCATCGACAGCACCATCATCAGTTCCACTACAACAACTACTTGTGGACATAACACAAAATAATTGTAACACCATTCCCTCATCATCCCAATTGTCTCCCTCGACAATGAACCTCAGCCTCCACACTGGCGGCGGCACCGCCGCTAGTGGTGGAGCCTCCAATTCAAGATACGGTGGTGATTATCCTGTGGTGGATATGGCTGATGCCATGTTCAACTCTGGTAGCAGCAGTGGTAATAACAGCATGGAATTTATCTTCTCTCCCGGTGAAGATAAAACTGATCCAAAAATTGAATAG 1011 0.4777 MEEVINSIRRACNLAQNLEHDLPNLANQQPAMLSLSIDQITEAFGAAKEKMLLFSRQNLTTSDSPPPPTLVHETTAMPVQSQMDATLMQEWLRSSHALTMDQLFQMHQFQTARSTLGGGDHGEDSDQRNMGSEGEMQGIHASPSRPRRRSSREGASQEKRKVTVPAPQFGNTDMPPEDGFTWRKYGQKEILGSKYPRSYYRCTHQKLYECQAKKQVQRLDHNPNIFEVTYRGNHTCHMSSTAPSSVPLQQLLVDITQNNCNTIPSSSQLSPSTMNLSLHTGGGTAASGGASNSRYGGDYPVVDMADAMFNSGSSSGNNSMEFIFSPGEDKTDPKIE 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0561 336 MobiDBLite consensus disorder prediction 264 293 - -
Aed10g0561 336 MobiDBLite consensus disorder prediction 113 181 - -
Aed10g0561 336 Gene3D WRKY domain 165 239 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed10g0561 336 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 248 IPR044810 GO:0003700
Aed10g0561 336 SMART WRKY_cls 176 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed10g0561 336 MobiDBLite consensus disorder prediction 315 336 - -
Aed10g0561 336 SUPERFAMILY WRKY DNA-binding domain 174 238 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed10g0561 336 Pfam WRKY DNA -binding domain 177 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed10g0561 336 PANTHER WRKY TRANSCRIPTION FACTOR 55 1 248 - -
Aed10g0561 336 ProSiteProfiles WRKY domain profile. 177 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed10g0561 336 MobiDBLite consensus disorder prediction 264 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0561 Aed-Chr10 4500403 4505238 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0561 1 333 WRKY Transcription Factor Family AT2G40740 39.701 4.93e-61 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed10g0561 WRKY 1.3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0561 - - gsj:114410180 499.204