Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed10g0561 | ATGGAAGAGGTAATAAATTCGATTCGACGCGCTTGCAATCTCGCCCAAAACCTTGAACACGACCTACCCAACTTGGCCAACCAGCAGCCAGCTATGCTGTCCTTGTCTATTGATCAGATCACTGAGGCTTTCGGTGCTGCCAAGGAAAAGATGTTGCTATTTTCCCGACAGAACCTAACTACCTCGGACTCTCCTCCTCCTCCAACGTTGGTTCATGAAACTACGGCGATGCCGGTGCAGTCTCAGATGGATGCTACTCTAATGCAGGAATGGCTAAGGTCTAGTCATGCACTGACAATGGATCAGTTGTTTCAAATGCATCAGTTCCAAACTGCAAGGAGCACTCTCGGAGGGGGAGATCATGGGGAAGATTCTGATCAGAGAAACATGGGATCTGAAGGGGAAATGCAAGGAATACACGCATCACCCTCGCGACCAAGACGAAGAAGCAGTAGGGAAGGTGCTAGTCAAGAGAAGAGAAAGGTTACGGTTCCTGCTCCACAGTTTGGAAACACGGATATGCCACCGGAGGATGGCTTCACTTGGAGGAAATATGGCCAGAAAGAAATACTTGGCTCCAAGTACCCTAGGAGTTACTACAGGTGCACACACCAAAAGCTATACGAGTGCCAAGCCAAGAAGCAAGTGCAAAGACTTGATCACAACCCTAACATATTCGAAGTAACATACAGAGGAAACCACACGTGCCACATGTCATCGACAGCACCATCATCAGTTCCACTACAACAACTACTTGTGGACATAACACAAAATAATTGTAACACCATTCCCTCATCATCCCAATTGTCTCCCTCGACAATGAACCTCAGCCTCCACACTGGCGGCGGCACCGCCGCTAGTGGTGGAGCCTCCAATTCAAGATACGGTGGTGATTATCCTGTGGTGGATATGGCTGATGCCATGTTCAACTCTGGTAGCAGCAGTGGTAATAACAGCATGGAATTTATCTTCTCTCCCGGTGAAGATAAAACTGATCCAAAAATTGAATAG | 1011 | 0.4777 | MEEVINSIRRACNLAQNLEHDLPNLANQQPAMLSLSIDQITEAFGAAKEKMLLFSRQNLTTSDSPPPPTLVHETTAMPVQSQMDATLMQEWLRSSHALTMDQLFQMHQFQTARSTLGGGDHGEDSDQRNMGSEGEMQGIHASPSRPRRRSSREGASQEKRKVTVPAPQFGNTDMPPEDGFTWRKYGQKEILGSKYPRSYYRCTHQKLYECQAKKQVQRLDHNPNIFEVTYRGNHTCHMSSTAPSSVPLQQLLVDITQNNCNTIPSSSQLSPSTMNLSLHTGGGTAASGGASNSRYGGDYPVVDMADAMFNSGSSSGNNSMEFIFSPGEDKTDPKIE | 336 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed10g0561 | 336 | MobiDBLite | consensus disorder prediction | 264 | 293 | - | - | |
Aed10g0561 | 336 | MobiDBLite | consensus disorder prediction | 113 | 181 | - | - | |
Aed10g0561 | 336 | Gene3D | WRKY domain | 165 | 239 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Aed10g0561 | 336 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 1 | 248 | IPR044810 | GO:0003700 | |
Aed10g0561 | 336 | SMART | WRKY_cls | 176 | 238 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aed10g0561 | 336 | MobiDBLite | consensus disorder prediction | 315 | 336 | - | - | |
Aed10g0561 | 336 | SUPERFAMILY | WRKY DNA-binding domain | 174 | 238 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Aed10g0561 | 336 | Pfam | WRKY DNA -binding domain | 177 | 236 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aed10g0561 | 336 | PANTHER | WRKY TRANSCRIPTION FACTOR 55 | 1 | 248 | - | - | |
Aed10g0561 | 336 | ProSiteProfiles | WRKY domain profile. | 177 | 239 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aed10g0561 | 336 | MobiDBLite | consensus disorder prediction | 264 | 291 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed10g0561 | Aed-Chr10 | 4500403 | 4505238 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed10g0561 | 1 | 333 | WRKY Transcription Factor Family | AT2G40740 | 39.701 | 4.93e-61 | 196 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Aed10g0561 | WRKY | 1.3e-26 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed10g0561 | - | - | gsj:114410180 | 499.204 |