Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0560 ATGAGTATTCTCTTTCCAAGAAGTTTCTCATCGGCAAAGAGGAAAAGGGTCATTAGAGAACTGGTTCAGGGTCAAGACTACGCCATTCGGCTCAAGTTTCTTCTCCAGAAGCCTATTGGGCCAGATGGGTCTGTTTCGGCCAAGGAACTAGTGTCAAATGTGTTGAGATCTTTCGCCGAAACTCTCTCTGTCTTAACTTCTTCTTCCGAGGTGGATGCAAGTGGAGAAGATGCGTCGCAGGTGACAAGCATTATTCATCCGAGGTCTGAGGATGATTCAACTGATGAGAGTAGGAAGGGATCTTCATCTCTCTGCGTCACAAAGGATCGCAGAGGCTCCTATAAAAGAAGAAAAACTGAACAGACATGGACCATAGTTGCCCAAACTACTGATGATAATCATGCATGGAGAAAGTACGGACAAAAGGATATCCTAAATTCTCAATTTCCCAGGAGTTACTTTAGGTGCACCAGGAAGTTTGAACAAGATTGTCGAGCAACCAAACAGGTGCAAAGGATACAAGAGAATCCTGATATGTACAATATCACGTACATTGGCTTTCACACATGCAAAGACACTCTCAAGGTTCCACAAATTGTCACACATTCTGAAACTTGGGACTCACTTCTTGAGAATTCAAATCCTGACTCAAATGTTCCAAATGAACATGATTCCCCTAATATTGGATCACAAAGCCTAGTTGTAAAACAAGAATATCCCAATGATGAGACTGATCCAAGTGATCTTACTGCTAACCTGTGGTCTGATTTGAAGGACTTTGAACTATCCAATGACAAAATAGCATCTGAAAATGCAAACACTTGTCATGCTAATGCATGA 840 0.419 MSILFPRSFSSAKRKRVIRELVQGQDYAIRLKFLLQKPIGPDGSVSAKELVSNVLRSFAETLSVLTSSSEVDASGEDASQVTSIIHPRSEDDSTDESRKGSSSLCVTKDRRGSYKRRKTEQTWTIVAQTTDDNHAWRKYGQKDILNSQFPRSYFRCTRKFEQDCRATKQVQRIQENPDMYNITYIGFHTCKDTLKVPQIVTHSETWDSLLENSNPDSNVPNEHDSPNIGSQSLVVKQEYPNDETDPSDLTANLWSDLKDFELSNDKIASENANTCHANA 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0560 279 MobiDBLite consensus disorder prediction 88 105 - -
Aed10g0560 279 MobiDBLite consensus disorder prediction 73 87 - -
Aed10g0560 279 Pfam WRKY DNA -binding domain 131 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed10g0560 279 Gene3D WRKY domain 115 185 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed10g0560 279 MobiDBLite consensus disorder prediction 73 105 - -
Aed10g0560 279 ProSiteProfiles WRKY domain profile. 131 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed10g0560 279 PANTHER WRKY DNA-BINDING TRANSCRIPTION FACTOR 70 6 272 - -
Aed10g0560 279 MobiDBLite consensus disorder prediction 208 229 - -
Aed10g0560 279 SMART WRKY_cls 130 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed10g0560 279 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 6 272 IPR044810 GO:0003700
Aed10g0560 279 SUPERFAMILY WRKY DNA-binding domain 127 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0560 Aed-Chr10 4495493 4498078 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0560 12 227 WRKY Transcription Factor Family AT3G56400 39.286 1.57e-43 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed10g0560 WRKY 3.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0560 - - gmx:100778162 423.32