Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0548 ATGGAGGCATTGTTGTGCAGAAAAGTGGGTGATCCAACGGTATCTTTGGAAGACAACGACAGCCCAATAGTTTTGTCAAAGAATCACCCAATTCCCGAACTGGAATCTCCCACTGCCGTAAGAGTCAGAATCAAAGCCACAAGCTTGAACTTCGCAAACTACTTGCAGATACTGGGCAAGTACCAAGAGAAACCCCCTTTGCCTTTCATCCCCGGCTCCGACTTTTCCGGCTTCGTCGACGCCGTTGGCCCCAAAGTTTCAAACTTTCGAGTCGGAGACGCCGTTTGTTCCTTCGCCGCCCTCGGCTCCTTCGCTCAGTTCATCGTCGTTGACGAGTCCCAATTGTTTCGAGTTCCCCAAGGTTGTGATCTTGTTGCTGCTGGAGCACTTGCTGTGGCGTCTGGCACTTCTCATGTGGCACTTGTTCATAGGGCCCAATTGAGCCCCGGTCAGGTGTTGTTGGTTTTGGGTGCTGCTGGAGGTGTGGGACTTGCTGCTGTGCAAATTGGAAAAGCATGTGGGGCCATTGTCATTGCTGTTGCTAGGGGAGCTGAGAAGGTGCAGCTCTTGAAATCTCTTGGTATTGATCATGTGGTGGACTTGGGTAATGAAAATGTTACGCAAAGTATCAAACAGTTCCTTCTAGCTAAAAGGCTTAAGGGGATCGATGTCTTGTATGACCCGGTTGGAGGCAAGCTCACTAAAGAATCTTTGCGGCTTCTGAATTGGGGAGCTCACATTCTCATAATTGGGTTTGCGAGTGGAGAAGTTCCTGTCATCCCTGCTAACATAGCTCTTGTTAAGAATTGGACAGTGCATGGCCTTTACTGGGGTAGCTATAAAATACACCGCCCTGCTGTTCTCGAAGATTCACTCAAGGAGCTACTGTCTTGGTTGGCAAGAGGCTTGATTTCTATCCATATTTCTCATTCTTACCCCCTGCCAGAGGCCAACCTTGCTTTTTCTGCCATCAAAGATAGGAAAGTTATTGGGAAGGTGATGATTGTTTTTGATGAGAAACCTACAAGATCTAAGCTGTGA 1041 0.4822 MEALLCRKVGDPTVSLEDNDSPIVLSKNHPIPELESPTAVRVRIKATSLNFANYLQILGKYQEKPPLPFIPGSDFSGFVDAVGPKVSNFRVGDAVCSFAALGSFAQFIVVDESQLFRVPQGCDLVAAGALAVASGTSHVALVHRAQLSPGQVLLVLGAAGGVGLAAVQIGKACGAIVIAVARGAEKVQLLKSLGIDHVVDLGNENVTQSIKQFLLAKRLKGIDVLYDPVGGKLTKESLRLLNWGAHILIIGFASGEVPVIPANIALVKNWTVHGLYWGSYKIHRPAVLEDSLKELLSWLARGLISIHISHSYPLPEANLAFSAIKDRKVIGKVMIVFDEKPTRSKL 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0548 346 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 122 288 IPR036291 -
Aed10g0548 346 Pfam Zinc-binding dehydrogenase 161 300 IPR013149 -
Aed10g0548 346 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 150 171 IPR002364 GO:0008270|GO:0016491
Aed10g0548 346 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 1 336 - -
Aed10g0548 346 Gene3D - 34 331 - -
Aed10g0548 346 PANTHER QUINONE OXIDOREDUCTASE-LIKE PROTEIN 2 1 336 - -
Aed10g0548 346 SMART PKS_ER_names_mod 17 335 IPR020843 GO:0016491
Aed10g0548 346 Pfam Alcohol dehydrogenase GroES-like domain 38 97 IPR013154 -
Aed10g0548 346 CDD QOR1 1 335 - -
Aed10g0548 346 SUPERFAMILY GroES-like 27 151 IPR011032 -
Aed10g0548 346 Gene3D - 133 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0548 Aed-Chr10 4394566 4397444 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0548 68 266 Monolignol Biosynthesis Gene Families AT1G72680 25.957 8.35e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0548 K00344 - gmx:100817700 617.461