Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0529 ATGAAAATTGTTAAGGAATGGTTCAAGTGGTCGCAGACTACGCTTAGCATGCTTTTAGTGCAAGTTTTTGCAACTGGGATGCAGATTCTATCAAGGGTCATACTGGTTGAGGGCACTTTCATTTTCGCACTCATTGCATACCGTCATGTTGTGGCTGCTATTTGTGTTGCCCCTTTTGCTTTCTACTTTGAAAGAGGCAGCGCAAAGAAGTTGAGGTGGTCGATTTGGTTTTGGCTCTTCCTTAACGCTTTGGTGGGGATAACAGTGGCCATGGGACTGTTCTATTATGGTCTGCGAGACACGTCGGCTATTTACTCAGTCAATTTTCTCAGCTTGGTTCCAATTTTCACTTTCATTTTCTCTATTATTTGCAGAATGGAGAGGGTAGGGTTTGAAACATGGAGGAGTAAAGTGAAGACAGTGGGGGCAATCTTGTGTGTTGGGGGAGCATTAACAACTAGCCTATACAAGGGGAAGGAATTCTATATTATTGGTCAAAGACAAAGTAGTCAATATCACTATCACACTCACACTAGTACAATTGAGGCACATTCCAAAACTCACATGCTTCGTGGCACTCTCTTTTTGCTTGGCAGCTGCTTGTCATATACAGCTTGGTTCATTGTGCAAGTTAAGTTGCTTGAAATATTTCCGTTCAAATATTGGGGAACAATGCTCACGTGCATTATAGCATCAATTCAAGCAACCATAATAGGAATATGCTTAGATTGCAGAAAGGTTGCTTGGAGTTTAAAGTGGAATCTACAACTTATTACAATAATATACTCGGGAGCATTGGCTACGGCTGCTACATTTTGCTTAATTTATTGGGTAATTGCAATCAAAGGACCAACTTATCCCACAATGTTCAATCCATTGGCTCTTATTTTTGTGGCAATATCAGAAGCCATCTTACTGGGTGAACCAATCAGTCTTGGCATTTTGCTAGGCATGATTTTGATCCTAATAGGATTGTACTCCTTTTTGTGGGGCAAATTAGGAACGGAGACACAATGTATGCTTCAAGTATCTGGAGAAGTTTCAACAAGCATGGCAACTGAGTCTACTACTGGAGTGCACTCCACAGCCATAGTGGTACCAAGTTTTTCACCTACTAAATCAGTCCTTGGAGCTGAAAAGACTGGCAGAAATTGA 1155 0.4121 MKIVKEWFKWSQTTLSMLLVQVFATGMQILSRVILVEGTFIFALIAYRHVVAAICVAPFAFYFERGSAKKLRWSIWFWLFLNALVGITVAMGLFYYGLRDTSAIYSVNFLSLVPIFTFIFSIICRMERVGFETWRSKVKTVGAILCVGGALTTSLYKGKEFYIIGQRQSSQYHYHTHTSTIEAHSKTHMLRGTLFLLGSCLSYTAWFIVQVKLLEIFPFKYWGTMLTCIIASIQATIIGICLDCRKVAWSLKWNLQLITIIYSGALATAATFCLIYWVIAIKGPTYPTMFNPLALIFVAISEAILLGEPISLGILLGMILILIGLYSFLWGKLGTETQCMLQVSGEVSTSMATESTTGVHSTAIVVPSFSPTKSVLGAEKTGRN 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0529 384 PANTHER WAT1-RELATED PROTEIN 11 349 IPR030184 GO:0016021|GO:0022857
Aed10g0529 384 PANTHER WAT1-RELATED PROTEIN 11 349 - -
Aed10g0529 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 156 - -
Aed10g0529 384 Pfam EamA-like transporter family 15 150 IPR000620 GO:0016020|GO:0016021
Aed10g0529 384 Pfam EamA-like transporter family 191 328 IPR000620 GO:0016020|GO:0016021
Aed10g0529 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 253 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0529 Aed-Chr10 4264964 4269156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0529 15 332 Nodulin-like Gene Family AT1G09380 34.688 9.31e-58 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0529 - - gmx:100780316 625.55