Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0527 ATGGGTTCGGCGGAGGACTGTTATCCGTCTCGTGGGGATGACGTGGCGGCCGTGGTGTCTCTGGATTCGCTGCCGCTAGGGTTCCGATTCCGACCCACCGACGAGGAGCTCATCAATTACTACCTCCGACAGAAGATCAACGGTAATGGTCGCGAGGTTTGGGTCATCCGAGAAATTGATGTTTGCAAATGGGAGCCTTGGGACATGCCCGAATCCATATGTCCTTTGTCGCTTAAACATGATGAGAGCCTTGAGGTTTCGCATGGTGATGAAGAAGCAGATGCAGAACAGACTGCTTCCACTCCTGTTGCTGTATCCTCGTCACAGGTTACAGAAGATGATAAACATCATCTTCAGGCTGTTATCCCTGCGCACTCCGAGGAAGCAATATCCAATGCTATAACACCGGTTGATTGCCATATTGATGGATATGATGCTTGTAATGCTGATGCACCAAATCAAATTGTGGCACCTGTTGCAGAGCTATTGGATGACAAATTATTCTCCCCTGTACTTTCACATATTCAACCAGAATTTCAATATCAAGCAAACATTGAATCCGATGGTCAATATGGGCTTCAATATAGTACAAATGAGGCAAACATTTCAGACTTTTTGAATTCAGTTGTTAACTGGGATCAAGTGCCCTGTGACGACAACATATTAGGAAACTACATGGATTCTGAACTTGCCAATATGACTGTACGAAATGAACAACTTAGCACAAACTCAACACAAGGTACTGCACAGAGGAGAATCCGTTTGGTAAAGGCTACACAGGGCTCAGATAAGACAGTGAAAAGTGGAAGAGTTGCACCAGAAGAGCTTAATTCAAAACCAATAATTGCTTTGGAGAAGAAAGCCTTAGAAAACCATGCTTCTGAAGAAAGTGCTACTCTTACCAATGAACTGCAGAATTATTTCAAACCTGAGTCAACCGGAAAAAGAAAGATTTCGAAACAAGTTACAAAAGCAGGTTCCAGCTTGGGTTTAAAAGACATTTTATTGCTCAGAAAGGTGCCTTACATATCAAAGGTTTCCTCCAATTGCACCAAGTGCTCTTCTGTTTTTATAGTTTCTGCCTTTGTAATGGTCTCATTAGTGGTATTTACTGACATTTGCGGATTTCTTAAATTTTAA 1140 0.4263 MGSAEDCYPSRGDDVAAVVSLDSLPLGFRFRPTDEELINYYLRQKINGNGREVWVIREIDVCKWEPWDMPESICPLSLKHDESLEVSHGDEEADAEQTASTPVAVSSSQVTEDDKHHLQAVIPAHSEEAISNAITPVDCHIDGYDACNADAPNQIVAPVAELLDDKLFSPVLSHIQPEFQYQANIESDGQYGLQYSTNEANISDFLNSVVNWDQVPCDDNILGNYMDSELANMTVRNEQLSTNSTQGTAQRRIRLVKATQGSDKTVKSGRVAPEELNSKPIIALEKKALENHASEESATLTNELQNYFKPESTGKRKISKQVTKAGSSLGLKDILLLRKVPYISKVSSNCTKCSSVFIVSAFVMVSLVVFTDICGFLKF 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0527 379 Pfam No apical meristem (NAM) protein 25 72 IPR003441 GO:0003677|GO:0006355
Aed10g0527 379 MobiDBLite consensus disorder prediction 84 110 - -
Aed10g0527 379 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 19 70 - -
Aed10g0527 379 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 19 70 - -
Aed10g0527 379 SUPERFAMILY NAC domain 17 73 IPR036093 GO:0003677|GO:0006355
Aed10g0527 379 Gene3D NAC domain 33 97 IPR036093 GO:0003677|GO:0006355
Aed10g0527 379 ProSiteProfiles NAC domain profile. 24 162 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0527 Aed-Chr10 4252352 4255542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0527 18 80 NAC Transcription Factor Family AT3G49530 57.333 6.85e-23 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aed10g0527 NAM 6.5e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0527 - - gmx:100777071 209.149