Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0517 ATGGGTTCAACCGGTGAGACTCAGATTACTCCAACCCACGTGTCTGACGAAGAGGCAAACCTATTCGCCATGCAACTAGCGAGTGCCTCTGTCCTTCCCATGGTTCTTAAAACAGCTCTTGAGCTTGATTTGTTGGAAATCATAGCGAAACCTGGCTCAGGCGTTTACCTTTCACCCACAGACATTGCTTCTCAGCTTCCTACACACAACCCTGACGCACCCGTTATGTTGGACCGTATATTGCGGCTCTTGGCTTCCTACAATATCCTCTCTTTCTCTCTTCGCACTCTCCCTGATGGCAAAGTTGAGAGACTCTATGGTCTCGCCCCAGTTGCTAAGTACTTGGTCAAAAACGAAGATGGTGTCTCCATTGCTGCTCTCAACCTCATGAACCAGGATAAAGTCCTCATGGAAAGCTGGTACTATTTGAAAGATGCTGTCCTTGAAGGAGGCATTCCATTTAACAAAGCGTATGGAATGACAGCCTTTGAATACCACGGAACAGATCCAAGGTTTAACAAGGTTTTCAATAAGGGGATGGCTGATCACTCTACCATTACAATGAAGAAAATTCTTGAGACCTACACTGGCTTTGAGGGTCTTAAATCTCTTGTTGATGTTGGTGGTGGCACTGGTGCTGTAATCAACATGATTGTCTCTAAGTATCCTACTATTAAGGGCATTAATTTTGATTTGCCCCATGTCATTGAAGATGCCCCATCCTATCCAGTAGGAGTGGAGCATGTGGGTGGAGATATGTTTGTTAGTGTTCCAAAAGCTGATGCTATTTTTATGAAGTGGATTTGCCACGATTGGAGTGATGAGCACTGCTTGAAGTTTTTGAAGAACTGCTACGAGGCACTACCAGACAATGGAAAAGTGATTGTGGCGGAGTGCATTCTCCCAGTGGCTCCAGACTCAAGCTTGGCTACAAAGGGTGTGGTTCACATCGATGTCATCATGTTGGCTCATAATCCAGGTGGCAAAGAGAGAACAGAGAAAGAGTTTGAGGCTCTTGCCAAAGGGTCTGGATTCCAAGGATTCAGAGTCCTGTGCTGTGCTTTCAATACCTACGTCATGGAATTTCTCAAAAAGGTTTAA 1101 0.4523 MGSTGETQITPTHVSDEEANLFAMQLASASVLPMVLKTALELDLLEIIAKPGSGVYLSPTDIASQLPTHNPDAPVMLDRILRLLASYNILSFSLRTLPDGKVERLYGLAPVAKYLVKNEDGVSIAALNLMNQDKVLMESWYYLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMADHSTITMKKILETYTGFEGLKSLVDVGGGTGAVINMIVSKYPTIKGINFDLPHVIEDAPSYPVGVEHVGGDMFVSVPKADAIFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTEKEFEALAKGSGFQGFRVLCCAFNTYVMEFLKKV 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0517 366 PIRSF O-mtase 1 364 IPR016461 GO:0008168
Aed10g0517 366 PANTHER O-METHYLTRANSFERASE 1 365 IPR016461 GO:0008168
Aed10g0517 366 Pfam Dimerisation domain 34 85 IPR012967 GO:0046983
Aed10g0517 366 SUPERFAMILY "Winged helix" DNA-binding domain 15 119 IPR036390 -
Aed10g0517 366 PANTHER BNAA10G07270D PROTEIN 1 365 - -
Aed10g0517 366 Pfam O-methyltransferase domain 140 346 IPR001077 GO:0008171
Aed10g0517 366 Gene3D Vaccinia Virus protein VP39 116 364 IPR029063 -
Aed10g0517 366 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 121 362 IPR029063 -
Aed10g0517 366 CDD AdoMet_MTases 204 296 - -
Aed10g0517 366 Gene3D - 1 115 IPR036388 -
Aed10g0517 366 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 364 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0517 Aed-Chr10 4205210 4206959 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0517 1 366 Monolignol Biosynthesis Gene Families AT5G54160 78.689 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0517 K13066 - gmx:100780100 714.146