Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0510 ATGGTGTTGGCACTTGTTCTTTCCGCAAACCATTCATCATCATGTTTGTGTTCTTCTAGTTCCACCTCCTTTTATCATCCACTACCTAACCCTTCTTCACACTCCCTCCATTATTCAACTTCAACAACCTTCCATCCTAAACACCCCCAATGCTCTCTCCTCCTCATCAGACCACAACCATCAAACAAGACCTCCATTCACCGCCGCCGCTGCATTAACTCCCTCGCAACCGTCGACGCCGGATTCGCGTCGTTCATTGCTCTGTTTCAAGACATTGGAATCGGCTTGGAGGAGACCCAAGCGCTCTTGTCAAACAACCCTGAACTAACCTCCGTCTCAACAGACTCATTGCGCGCTCGCGTTCTCTCTCTACGCTCTCTCGGCTTCGACCCTCTCACTCTCTCCAAATTACTCACAAAGCGTCCAACGCTTCTAACAGCCAACGAGATTGACCCTTTGTTAACCTTCCTCAGAGACAATTTGCAAGGAAAACTCGACAAACAGCAACTCAATCGCCTCTTATCTGCCACGGAGCAAAATTTCTTGGAGTGTTTTCCTCAGAAGGTTCAATTCCTCGTTGACCGAGGAATCCCCGTTGACCAGGTTGTGCACGTGCTCAACAAAGTGAATTTGGCTAAGGTCTTGTGTCGCAGGTCGCTTGAAGAGATTGACAGAACCATATCCTTCTTGGAAACCTTTGGTGGCATTGCTTTGATTCTGAAACGCCCTCAAATTTTGAACCATGATTTGGATACTCAAATTGTTCCTAGAGTCAAGTTTCTGATGGAGCTTAGTGATGGAGACGAGGACAGTGTTAGGAAAGTGCTGCTTAGGTTTCCCATATTCTTGAACTATAGTGTGGAACATGTGGAGGAACATGTAGGGTTTCTGAGTTCTTTCGCTGAACTTGATTACAAACAGATATTTAGGATAATACAAGTTTACCCTGCTATTGTTACTACTAGCAGAGAGAGGAAACTGCGTCCTAGAATACAGTTTCTCAAGGATTGTGAGTTGGATTCAGATGACATCTTCAAGTTCTTGATTAAAGGGCCCACATTTCTAAGCATTTCGTTCAATGAGAACATCGCATATAAGCTGGTGTTGCTGGTGAAGATTGGCTATAGGTATAGGTCAAAGGACTTGGCAATGGCAGTAAGGTCTGCTACTAGGACGAACTGTGGGAACATGCAGAAGGTCATTAGTTTGTTCTTGAATTATGGGTTTTCATGTGAAGACATCGTTGCTATGAGCAAGAAGCAGCCGCAGATACTGCAGTATAATCACGCCTCTTTGGAGATGAAGATGGAGTACTTGATAGAGGAGATGGGGCGTGACATTGAGGAATTGCTGCTTTTTCCTGCATTTCTTGGGTACAAGTTGGATGATAGGATTAAGCATAGGTTTGAAGTGAAGAAGAGTATTAGAGGCAGGGGAATGTCTATCAATAAGCTTTTAACTGTTTCTGAGGAGACATTTGCTGGCAAACAAAAAAAGGACATGCCATAG 1509 0.4453 MVLALVLSANHSSSCLCSSSSTSFYHPLPNPSSHSLHYSTSTTFHPKHPQCSLLLIRPQPSNKTSIHRRRCINSLATVDAGFASFIALFQDIGIGLEETQALLSNNPELTSVSTDSLRARVLSLRSLGFDPLTLSKLLTKRPTLLTANEIDPLLTFLRDNLQGKLDKQQLNRLLSATEQNFLECFPQKVQFLVDRGIPVDQVVHVLNKVNLAKVLCRRSLEEIDRTISFLETFGGIALILKRPQILNHDLDTQIVPRVKFLMELSDGDEDSVRKVLLRFPIFLNYSVEHVEEHVGFLSSFAELDYKQIFRIIQVYPAIVTTSRERKLRPRIQFLKDCELDSDDIFKFLIKGPTFLSISFNENIAYKLVLLVKIGYRYRSKDLAMAVRSATRTNCGNMQKVISLFLNYGFSCEDIVAMSKKQPQILQYNHASLEMKMEYLIEEMGRDIEELLLFPAFLGYKLDDRIKHRFEVKKSIRGRGMSINKLLTVSEETFAGKQKKDMP 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0510 502 Gene3D Transcription termination factor 3, mitochondrial 74 264 IPR038538 -
Aed10g0510 502 Gene3D Transcription termination factor 3, mitochondrial 293 500 IPR038538 -
Aed10g0510 502 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF8, CHLOROPLASTIC 91 499 - -
Aed10g0510 502 PANTHER CGI-12 PROTEIN-RELATED 91 499 IPR003690 GO:0003690|GO:0006355
Aed10g0510 502 SMART mt_12 135 164 IPR003690 GO:0003690|GO:0006355
Aed10g0510 502 SMART mt_12 447 478 IPR003690 GO:0003690|GO:0006355
Aed10g0510 502 SMART mt_12 309 340 IPR003690 GO:0003690|GO:0006355
Aed10g0510 502 SMART mt_12 415 446 IPR003690 GO:0003690|GO:0006355
Aed10g0510 502 SMART mt_12 345 376 IPR003690 GO:0003690|GO:0006355
Aed10g0510 502 SMART mt_12 236 267 IPR003690 GO:0003690|GO:0006355
Aed10g0510 502 SMART mt_12 273 304 IPR003690 GO:0003690|GO:0006355
Aed10g0510 502 SMART mt_12 100 130 IPR003690 GO:0003690|GO:0006355
Aed10g0510 502 Pfam mTERF 331 494 IPR003690 GO:0003690|GO:0006355
Aed10g0510 502 Pfam mTERF 306 403 IPR003690 GO:0003690|GO:0006355
Aed10g0510 502 Pfam mTERF 85 298 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aed10g0510 mTERF 2.5e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0510 - - gmx:100799904 825.083