Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0493 ATGATTTACGTTAGACTTATTATGCTCCTGTGTTTCCTACTTCATAATTTCCATGACACAGTAATATGCAACAATGTTGACACAGACAGAGATGCACTTATTTCTTTCAAATCCCAAGTGAGTGACCCAAAAAACACTCTCTCTGGTTGGTCTGCACATTCCAATCACTGCACCTGGTATGGTGTTACCTGCACCAAACTTGAAAAGAGGGTCCAATCTCTCACTCTTCCAGGACTTGACCTCTCTGGCAAACTCACCCCTCAGCTTTCAAACCTCACTTTCCTACACACACTTGACTTTTCCAACAACAATTTCCATGGCCAAATCCCCCAAGAGTTTGGTCATCTCAACCGTCTAAAAAATGTAGACATGTCAATCAATAACCTCGCAGGTGAGTTACCTCCATCATTTGGCAATCTCATTTCTCTTGAGAATCTTGCCTTGGCAAGAAACCGCTTTGTGGGTCAGATTCCAACTCAACTTGGTAATCTCCAAAACCTTTCCTACCTTCAACTCTCAGAAAACTTCTTCTCTGGCCACTTTCCAATTTCAATCTTCAACCTATCATCCTTAGTCTTCTTATCCGTGTCAAATAACAACCTGTCAGGCTACTTACCCCAAAATTTTGGCCATCACCTACCAAATTTAAAGAATATTTCCCTAGCAAGCAATTCGTTTGAAGGGTTAATTCCTGAGTCCATATCCAATGCCTCACATCTTCAATACATTGACCTTGCTCATAATAATTTCAATGGCTCCATACCTATACTTAAAAACTTGAAAAGCCTCACCTACCTTACTCTTGGTAATAACTTTCTCACTTCCAACACCTCGTTGAATTTTCAGTTCTTTGATTCCCTTACAAACTCCACCCAGTTGGAAATTCTCCTGATCAATGATAATTATTTGGCCGGGGAGCTTCCAAGCTCTGTTGCTAATCTCTCTGGCAATCTTCAACAATTCTGTGTTGCTAATAATAAGCTAACTGGTACCCTTCCTCAAGGAATGGAGAAATTTCAAAATCTCATATCTTTGTCTTTTGAAAACAATTCTTTCACTGGAGAGCTACCATCAGAAATAGGAGCACTACATAATCTACAGAGACTTGCGATATACATCAACAAATTGTCTGGGGAAATTCCAGACATTTTTGGAAATTTCACAAATCTGTATATCCTTGCAATGGGATATAACCAGTTCTCGGGTAGAATTCACTCAAGTATTGGACAATGCAAGAGATTAATTTTTCTTGACTTGGGAATGAACATGCTTGATGGAACCATACCAAGGGAGATTTTTCAGCTTTCTGGTTTAACAGGCTTGTATTTACAAGGAAACTCTCTGGATGGTTCGCTTCCTCATGAGGTCAACATCATGGCACAGCTTGAGACCATGGCTCTTTCTAACAACCAGTTGTCAGGGTACATTCCTAGGCAAATAGAGGGTTGTTCTAGCTTGAAGCGGCTTGAGATGGCAAACAACAAATTCAATGGCTCAATCCCAACTAATCTTGGGAATTTAGCATCCCTTGAGACTTTGGATTTATCATCAAACAATCTCACCGGCCCTATTCCTCAAAGTTTTGAAAAGCTCCAGTATATACAGACATTAAATTTGTCTTTCAACCATTTGGAAGGGGAGATTCCAATGAAAGGTGTGTTTACTAACCTTACCAGGTTTGATCTTCAAGGTAACAGCCAACTGTGCAGCCTTAACAAGGAAACTGTGCAGAATTTGGGAGTTCTCCTATGTGTTGTTGGGAAAAAGAAAAGAAGAAAGACCTTACTCCCTATCATCCTTGCAGTTGTTGGTGCCACTGCTTTGTTAATTGCAATGCTCCTTGTATTCTGGACAATCAAGAAGAAAAGAAAGGAGAGGAAAACCAAATATGGTCTAGGAGGCAAGGCTTCTACTCAGGGTGATGTGTACAGTTTTGGGATCCTACTCCTAGAGATGTTCACAGGCAAAAGACCAACTGATGAAATGTTCAAAGAAGGATTAAGTCTAAGCAAATTTGTCTCAGCCGTGGATGAGAATGAAGTAATGAAGGTTGCTGATCGATGGCTTATTGATAATTATGAGTATTCAAATTCAACACAAAGCTCAAACACTGGGATGCACAAAGCTGAGGAGTGCATAGCTGGTGTGATAAGAGTTGGGTTGGGTTGCACAGCAGATCAACCCAAAGATCGATGGAGCATGAGAGAAACCTCAACAAAGTTGCAAGCAATTAGGCACTCTTTCATGGCCTTGTCAAGCACCTCAACTACCCCAGATGCAGTAGTCACTCTAGAAAATCATAGTCACTGA 2310 0.4061 MIYVRLIMLLCFLLHNFHDTVICNNVDTDRDALISFKSQVSDPKNTLSGWSAHSNHCTWYGVTCTKLEKRVQSLTLPGLDLSGKLTPQLSNLTFLHTLDFSNNNFHGQIPQEFGHLNRLKNVDMSINNLAGELPPSFGNLISLENLALARNRFVGQIPTQLGNLQNLSYLQLSENFFSGHFPISIFNLSSLVFLSVSNNNLSGYLPQNFGHHLPNLKNISLASNSFEGLIPESISNASHLQYIDLAHNNFNGSIPILKNLKSLTYLTLGNNFLTSNTSLNFQFFDSLTNSTQLEILLINDNYLAGELPSSVANLSGNLQQFCVANNKLTGTLPQGMEKFQNLISLSFENNSFTGELPSEIGALHNLQRLAIYINKLSGEIPDIFGNFTNLYILAMGYNQFSGRIHSSIGQCKRLIFLDLGMNMLDGTIPREIFQLSGLTGLYLQGNSLDGSLPHEVNIMAQLETMALSNNQLSGYIPRQIEGCSSLKRLEMANNKFNGSIPTNLGNLASLETLDLSSNNLTGPIPQSFEKLQYIQTLNLSFNHLEGEIPMKGVFTNLTRFDLQGNSQLCSLNKETVQNLGVLLCVVGKKKRRKTLLPIILAVVGATALLIAMLLVFWTIKKKRKERKTKYGLGGKASTQGDVYSFGILLLEMFTGKRPTDEMFKEGLSLSKFVSAVDENEVMKVADRWLIDNYEYSNSTQSSNTGMHKAEECIAGVIRVGLGCTADQPKDRWSMRETSTKLQAIRHSFMALSSTSTTPDAVVTLENHSH 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0493 769 SUPERFAMILY L domain-like 316 572 - -
Aed10g0493 769 Gene3D Ribonuclease Inhibitor 143 212 IPR032675 -
Aed10g0493 769 Gene3D Ribonuclease Inhibitor 27 142 IPR032675 -
Aed10g0493 769 Gene3D Ribonuclease Inhibitor 213 578 IPR032675 -
Aed10g0493 769 SUPERFAMILY Protein kinase-like (PK-like) 632 755 IPR011009 -
Aed10g0493 769 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 91 - -
Aed10g0493 769 PANTHER RECEPTOR-LIKE PROTEIN 55 629 741 - -
Aed10g0493 769 PANTHER RECEPTOR-LIKE PROTEIN 55 90 140 - -
Aed10g0493 769 PANTHER RECEPTOR-LIKE PROTEIN 55 139 627 - -
Aed10g0493 769 SMART LRR_typ_2 213 236 IPR003591 -
Aed10g0493 769 SMART LRR_typ_2 459 483 IPR003591 -
Aed10g0493 769 SMART LRR_typ_2 188 211 IPR003591 -
Aed10g0493 769 SMART LRR_typ_2 531 556 IPR003591 -
Aed10g0493 769 SMART LRR_typ_2 260 286 IPR003591 -
Aed10g0493 769 SMART LRR_typ_2 363 386 IPR003591 -
Aed10g0493 769 SMART LRR_typ_2 92 115 IPR003591 -
Aed10g0493 769 SMART LRR_typ_2 140 164 IPR003591 -
Aed10g0493 769 SMART LRR_typ_2 507 530 IPR003591 -
Aed10g0493 769 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 629 741 - -
Aed10g0493 769 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 90 140 - -
Aed10g0493 769 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 139 627 - -
Aed10g0493 769 PANTHER RECEPTOR-LIKE PROTEIN 55 1 91 - -
Aed10g0493 769 Gene3D Transferase(Phosphotransferase) domain 1 618 760 - -
Aed10g0493 769 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Aed10g0493 769 Pfam Leucine rich repeat 494 544 IPR001611 GO:0005515
Aed10g0493 769 Pfam Leucine rich repeat 214 271 IPR001611 GO:0005515
Aed10g0493 769 SUPERFAMILY L domain-like 26 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0493 Aed-Chr10 4058385 4061649 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0493 629 756 Receptor kinase-like Gene Family AT5G20480 35.938 4.01e-17 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Aed10g0493 LRR_8 6.9e-07 CL0022
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0493 - - gmx:100776054 973