Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0492 ATGGGTGAATTTGGCGTGGGAAAAAGAAGGAGCATCAGCACCAACAACAGTGTTCTTGGGTTGGATGTGAATGTGAAGAAAGTGCAGAGCCCTGAAGCATTATTCCATAATAGGATGACGATGATGGCGCATCATAATCATCACCACCGTCCATTGTCATCACCCTTTGATAATAATGATTCCCCCTGTGCTGGTGATGGTGATGGTCCCACGCCTTACATGTCTTTTACTAATCATATAAACCTTGTTAGTGGTGCTTCTGTTCTTGCTCCTGCTATTGATGGTGGCTGTGGTGCTGCTCCTGCACCTGTAAGAACTTTGCAGCCTTTTGACATTTCTCCTACCACAACAACCTTCAAACCCCCCTCAGCAGGTGGGATGGCGGCTTCGTTGGGGTTTCCTTTCACAAGTGCACAATGGAGGGAGCTTGAAAGACAAGCTATGATATACAAGTACATGATGGCTTCTGTTCCTGTTCCACACGATCTCCTAATACCTACTTCACTCACACCCTCTTCTCGCTCTTCCTGCACTATGGATGGTGGTTTCAATCTGAGGTTGGCAAATAGCACTGACCCGGAGCCAGGTAGGTGCAGAAGAACAGATGGTAAAAAATGGAGATGTTCAAGAGATGTGGCTCCTAACCACAAGTACTGCGAGCGCCACATGCATAGAGGCCGTCCCCGTTCAAGAAAGCCTGTGGAAGTTAACACCAACATCACCACCACTCCCACTAGCATAAACAACAACAACAATAGTAACAACCACCTAGTCAAAAAGGCTCGCCATGAGTGTAATCCTTTTGCTACATCAGATGTTACTGTGGCCATTTCCAACCCCACATCCAGAAAAGATGGATCTTCACCCCATTTTCTTGGGTCTGCTACCACTCAGCCATACCTTGAATCTTCCCTCTCTCTTGCTAACTTTGGTCTCAAAGCTGCCAGTTTTGACTCTGTGGCTTCTGTTTCTGCAGATAAGGAACCCAGGGGTTTGGAGTGGATGCTGAATGGAGATCCTATTTCCCTGGGTGCTTCTGACTCACAATGGCAGTCACTGATGCATCATAATAAAGTTGGAATGAGCGGTGATAGTTCCTGTAACACCACCGAGTCTCAGTATCTGAATTCATTTGCTGCACCATATAATAGCTCTGGACTGGAACAACAACAACAACAACAGCAAAACAGACGCCACCACCACCCTTTTTTCCTGAACCCTCTTGTTGTTCCTATGGAAAATCTCCAACCAGAGAAGCCAAGGGGTTTCATTGATGCTTGGTCAAATGCAGAAAGCAATGCCAACACAAGCACCAACAACAAGAACAACTCTGCTGCTGCATCAATTGGTAAACTATCCCTCTCTTCTCTTGATCTATCAATGGGGGGTGGTGCTGTGAATGAAGATGTTGTGGGTAATGTTAACATGGGTTTGGGACTAATTGAGAGTACTAATGGAAGCACACACACTACTGATACCAAAATCTCTCTCTCAAATTGGCTCAACCCAGCACCTTGGGTGGCTTCAACACTTGGGGGTCCTCTAGCTGAAGTTCTAAGATCAAGCACAGTCACTGCCACAACTGAAGCAACAAACTCCAACACACCCTCACCAGCCACCACCACCACCACCACACATGTTGAATCAATGGTGTCATCTCCATCTGGGGTGTTGCAGAAAACGCTTGTTTCATTGTCTGATAGCAGTAGCAATAGCAGCCCAACGGTTGCATCATCAAGGGCCAATTCTGAAATGGCCTTACTCAGGTTTCATTCAAATGTGTAA 1785 0.4633 MGEFGVGKRRSISTNNSVLGLDVNVKKVQSPEALFHNRMTMMAHHNHHHRPLSSPFDNNDSPCAGDGDGPTPYMSFTNHINLVSGASVLAPAIDGGCGAAPAPVRTLQPFDISPTTTTFKPPSAGGMAASLGFPFTSAQWRELERQAMIYKYMMASVPVPHDLLIPTSLTPSSRSSCTMDGGFNLRLANSTDPEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKPVEVNTNITTTPTSINNNNNSNNHLVKKARHECNPFATSDVTVAISNPTSRKDGSSPHFLGSATTQPYLESSLSLANFGLKAASFDSVASVSADKEPRGLEWMLNGDPISLGASDSQWQSLMHHNKVGMSGDSSCNTTESQYLNSFAAPYNSSGLEQQQQQQQNRRHHHPFFLNPLVVPMENLQPEKPRGFIDAWSNAESNANTSTNNKNNSAAASIGKLSLSSLDLSMGGGAVNEDVVGNVNMGLGLIESTNGSTHTTDTKISLSNWLNPAPWVASTLGGPLAEVLRSSTVTATTEATNSNTPSPATTTTTTHVESMVSSPSGVLQKTLVSLSDSSSNSSPTVASSRANSEMALLRFHSNV 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0492 594 Pfam WRC 193 235 IPR014977 -
Aed10g0492 594 PANTHER - 102 582 IPR031137 GO:0005634|GO:0006351|GO:0032502
Aed10g0492 594 MobiDBLite consensus disorder prediction 562 581 - -
Aed10g0492 594 ProSiteProfiles QLQ domain profile. 134 169 IPR014978 GO:0005524|GO:0005634|GO:0006355
Aed10g0492 594 PANTHER GROWTH-REGULATING FACTOR 7 102 582 - -
Aed10g0492 594 MobiDBLite consensus disorder prediction 47 68 - -
Aed10g0492 594 SMART QLQ_2 133 169 IPR014978 GO:0005524|GO:0005634|GO:0006355
Aed10g0492 594 ProSiteProfiles WRC domain profile. 192 236 IPR014977 -
Aed10g0492 594 Pfam QLQ 134 166 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0492 Aed-Chr10 4052550 4056341 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0492 416 571 GRF Transcription Factor Family AT5G53660 35.928 1.98e-14 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Aed10g0492 WRC 6.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0492 - - gmx:100796948 827.394