Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0487 ATGGGGATTCTTGACGATCAAAAACACCACCATCATCACATGAGTTTTCATTTGCACATTCCTCACATCCACTTTCACCATCACCATCACGAGAATTCGAAGAAGGATATGAATAAGGGAATTCCGAAAGGGTGTTTGACGATCTTGGTTGGGCAAGGTGAAGAAGAGCAACAGAGGTTCGTGATTCCTGTGATGTACATGAACCACCCATTGTTCATGCAGTTGCTCAAAGAAGCTGAAGATGAATACGGCTTCGACCAGAAAGGACCCATCACCATCCCGTGCCACGTGGAGCACTTCCGCGCCGTCCAAGGCTTGATCGATAGGGACAAATCTCTCCTCCACCACCACCACCACCATCACCATGCTTGGTGCTTTAAAGTTTGA 387 0.4755 MGILDDQKHHHHHMSFHLHIPHIHFHHHHHENSKKDMNKGIPKGCLTILVGQGEEEQQRFVIPVMYMNHPLFMQLLKEAEDEYGFDQKGPITIPCHVEHFRAVQGLIDRDKSLLHHHHHHHHAWCFKV 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0487 128 Pfam Auxin responsive protein 33 103 IPR003676 GO:0009733
Aed10g0487 128 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 19 123 IPR003676 GO:0009733
Aed10g0487 128 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY 19 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0487 Aed-Chr10 4017709 4018095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0487 41 101 Calmodulin-binding Proteins AT5G20810 52.459 3.14e-17 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0487 K14488 - gmx:100526867 167.548