Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0455 ATGGATTTTGTCTCCGACCACGATTTCCCCAACCTTGACATCGTTTCTCATGGCCTCACCAGCTCCTGTGTTTGCTCTGTTCATCATCTCAACGTCGTCGACACTCACAACAACATAATGGAGATTTCACCATTGGAGGGTTTCTCCGAGCTTGATTGGCCATACTCAAGCAATCAACTTTGCTTCAATGAGCTCCCGGATTTGGAAAATTTGGATCTTGATTTCAGCCTCCCGGATTTGGAAGATTTGGAGGAGGAGTATGACCAAAAGCCCTTGAACATTGTTTTTCCCCTTCAAGGGTTTCATTGCAATAATAATCAGGGTTTGGGGGATGATGCTTTATTGGCCATTCAACATGTTTCTGCCACTTGTGCTGTGAAGAAAGAGGAAGTGCAGATTAATAATAATACCATTGATCAGAGTTCATTTCCAGTGTCAGTGTCTCTTGCTAGCAGCAGCATTACACAGAAGAGGTCATCATCATCATCATCATGTGTGCTGGAATTTGAAGACATAAAGAAGCATTTTAATGTTCCAATTTCTGAAGCTGCCAAGCAAATGAATGTTGGGATAACCATGCTGAAGAAAAGGTGCAGGGAGCTCAACATCATGAGATGGCCTCATAGGAAACTCAAGAGCTTGCAACTACTCATCGACAATTTTAAGGAAATAGGTTTGGAAGATGAGGTTCAAAGGTTGGAGAAGCATAAAAGGTTGTTGGAAAAATTACCAGGAATGGAACTAAGTAAAGAAGTCAAGAAGCTGAGGCAAGCTTGCTTTAAAGCTAATTACAAGAAGAGAAAGTGCATGGCACTACTCCAAGCTTGA 828 0.4191 MDFVSDHDFPNLDIVSHGLTSSCVCSVHHLNVVDTHNNIMEISPLEGFSELDWPYSSNQLCFNELPDLENLDLDFSLPDLEDLEEEYDQKPLNIVFPLQGFHCNNNQGLGDDALLAIQHVSATCAVKKEEVQINNNTIDQSSFPVSVSLASSSITQKRSSSSSSCVLEFEDIKKHFNVPISEAAKQMNVGITMLKKRCRELNIMRWPHRKLKSLQLLIDNFKEIGLEDEVQRLEKHKRLLEKLPGMELSKEVKKLRQACFKANYKKRKCMALLQA 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0455 275 Coils Coil 223 243 - -
Aed10g0455 275 PANTHER PROTEIN RKD4 157 269 - -
Aed10g0455 275 ProSiteProfiles RWP-RK domain profile. 150 235 IPR003035 -
Aed10g0455 275 PANTHER PROTEIN RKD4 157 269 IPR044607 GO:0003700
Aed10g0455 275 Pfam RWP-RK domain 167 214 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0455 Aed-Chr10 3742377 3743709 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0455 167 271 AtRKD Transcription Factor Family AT5G53040 61.905 1.34e-40 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Aed10g0455 RWP-RK 5e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0455 - - gmx:102667394 287.345