Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0451 ATGTACACACACGCTCTACCTCTGCAAAACTCTGTCCTCACTCACACCATTCTCTTTTTCTTTCTTTCTCTGAATTCTTCACAACTCTCTCCGACTCCGCTAAATGACCAAACACTGCTTTCTCATGAGTCTTCTCAAATATGCCAAGTAAATCCCAAACACCAACAACATTGGCCTCTGCACCAGATCCTTTCCTCGACGACGATGGGGAAGAAAGGAGGGAGCTGGTTCTCGTCGGTGAAGAAAGTTTTCAAGTCCTCTTCTAAAGACTCGCCGCCGCCGCCGCCGCTGCCGGAGAACAAGTCGTTTACCAGTCGAGTCCAAGTTATTGAATTAGTCACGAGTCATGATGATGATGACCTTTTACTCAATCCTCAAGAAAGCAGAAAATCGCTTAACTGCAGCCTGCCACATAGCATAAAGGATGATCGACCCTGTTTTTTAGGACCATCGACCCTAATACAGTGTGTACATGGTCCCCTCTCATGTGAACATAAGGAAGAGCAGTGGCAGCATGAGGCGCCAGAGGAGGTTTCTGTTGAGCATTTTCCTGCAGAGATTAGTTCTCCAGATGTTACCAATGAATTAGGGAGTACTGCCACGTCAACACCGGTCACTGAAGATAGAACACATGCTGTTGCCTTTGCAGCAGCAACCGCCGCCGCTGCCGAGGCGGCGGTGGCGGCTGCTCATGCAGCCGCTAGAGTTGTGAGGTTGGCGGGTTATGGACGCCAGTACTCCATGGAAGAAAGAGCTGCAATACTCATTCAATCATACTACAGAGGCTACCTTGCTCGACGTGCATTGCGTGCATTGAAGGGATTGGTGAGGCTGCAGGCGCTAGTGAGGGGACATAATGTTCGAAAGCAAGCGCAGATGACAATGCGATGCATGCATGCATTGGTGAGAGTACAGGCAAGAGTGAGAGCTCGGAGATTACAGTTGACTGAGGAGAAGCTTCAGAGAAGAGTTGAGGAACATGAACAACAACAACCTAAGCAGCAGCTTTTGAGTCCCATAAAAATGTTAGACATGGATGGCGCCTCCTGGGACAGTAGGCGCCAAAGTAGCCAGCAAATTAAGGAAAATGATGTCAGGAAACATGAAGCTCTTATGAAAAGAGAGAGAGCTCTTGCTTACGCTTTCAACTGCCAGCAGCAGCTGAAGCAATACATGCACATAGACCCAAACGGTGATGACATTGGGCGTGAAAGAGCACAATTGGATTGGAACTGGTTGGAGCGTTGGATGTCATCACAATCACCCAACTTAAGACCACGTGAGACCCTTCCCAGGTCTCTCGCCGCGGCCACCACCACCGATGACATGTCTGAAGAAAAAACAGTTGAAATGGACATGGCTGCAACAACTCATGCCAACATGGGCTTCATAAACCATGAATCTTTTGACACAAGCCCAATTTCTAATAGGTACCACCAGCGCCACCACAGTGCTGGTGTCCCTAGCTACATGGCCCCAACCCAGTCTGCGAAGGCCAAGGCACGAAGTCAACAAGGCCCGTTTAAGCAACGAGGTTCACCTGGGCCCAACTGGAACTCATCCACAAGGAGAAATTCTGCTAGTGGGTTGGGCATGGGCTGTGACTCGTCTAGCTCTAGTGGGCCCGTTGCAGCCCATGTCTTCCCAAGAAGCCCAAACCCAAAGATTAGTGAGATTCGCCTCCAATCTAGACGGATTTCTGGTAGCAGCCCGGATAATGTTCACATTGAGGATTGGGCCCTTCCCCTTGGAGCCACCAATGGTTGGGCTTGA 1773 0.498 MYTHALPLQNSVLTHTILFFFLSLNSSQLSPTPLNDQTLLSHESSQICQVNPKHQQHWPLHQILSSTTMGKKGGSWFSSVKKVFKSSSKDSPPPPPLPENKSFTSRVQVIELVTSHDDDDLLLNPQESRKSLNCSLPHSIKDDRPCFLGPSTLIQCVHGPLSCEHKEEQWQHEAPEEVSVEHFPAEISSPDVTNELGSTATSTPVTEDRTHAVAFAAATAAAAEAAVAAAHAAARVVRLAGYGRQYSMEERAAILIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMHALVRVQARVRARRLQLTEEKLQRRVEEHEQQQPKQQLLSPIKMLDMDGASWDSRRQSSQQIKENDVRKHEALMKRERALAYAFNCQQQLKQYMHIDPNGDDIGRERAQLDWNWLERWMSSQSPNLRPRETLPRSLAAATTTDDMSEEKTVEMDMAATTHANMGFINHESFDTSPISNRYHQRHHSAGVPSYMAPTQSAKAKARSQQGPFKQRGSPGPNWNSSTRRNSASGLGMGCDSSSSSGPVAAHVFPRSPNPKISEIRLQSRRISGSSPDNVHIEDWALPLGATNGWA 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0451 590 Pfam IQ calmodulin-binding motif 276 291 IPR000048 GO:0005515
Aed10g0451 590 Pfam IQ calmodulin-binding motif 250 270 IPR000048 GO:0005515
Aed10g0451 590 Gene3D - 249 291 - -
Aed10g0451 590 ProSiteProfiles IQ motif profile. 273 300 IPR000048 GO:0005515
Aed10g0451 590 SMART iq_5 248 270 IPR000048 GO:0005515
Aed10g0451 590 SMART iq_5 271 292 IPR000048 GO:0005515
Aed10g0451 590 MobiDBLite consensus disorder prediction 492 556 - -
Aed10g0451 590 Pfam Protein of unknown function (DUF4005) 472 528 IPR025064 -
Aed10g0451 590 Coils Coil 310 330 - -
Aed10g0451 590 PANTHER IQ-DOMAIN 21 69 562 - -
Aed10g0451 590 PANTHER IQ-DOMAIN 5-RELATED 69 562 - -
Aed10g0451 590 MobiDBLite consensus disorder prediction 496 544 - -
Aed10g0451 590 MobiDBLite consensus disorder prediction 422 445 - -
Aed10g0451 590 MobiDBLite consensus disorder prediction 422 442 - -
Aed10g0451 590 ProSiteProfiles IQ motif profile. 249 277 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0451 Aed-Chr10 3704550 3708863 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0451 169 560 IQD Protein Family AT3G49260 48.598 9.41e-84 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0451 - - gmx:100808965 648.662