Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0440 ATGTATGCTGAGACTGGTCTTCTCTTCCCATATTTGAACAACATCTCTCACGAGCTTCATCAGCTTGAGGAGTACTGCAAAACCCAGAAGTCAAATGCTTCGATATTGGATGACTTTATTCAGTCTTCTGCCATGTCAGAGTATGATTTGGCAGCAGAGGGAGATCTGTTCAAAGCTCCTGAACCAATTATTGAAGAGCCAATGATGGACCTGGATCTCATGACAGCTGCCATCTCAATGATGTCTCGCGGTGAAGATGTCTCGTCACAGGGACTAAAATCCACAGATATTGATATTCTTCAAAATGATCAGTTTTTTAATGAGGTGTTCTATGAATGCAAAAAGGATCTCTTAGAGAAGGCAGCAATAGAGCCACCACTCTCCGAGATTCTGGAAATCAAGGTTCCTCTTATGAACATCGATGAGAACTCGATTCAAGAAAACAAGCCACTTCCTGACATGCAATTAGCAAAGAGTGTCAGCTCAGGAAGTTTGGACTGGATGCGTGGAGCAGCAATGAGGCCTGCTTTCATTGATATCCCTGAAATAGATTTCAATGCAGTTTATGGCATGCGGCGATCATTTAGTGAAGGAGATATAAAGACTCTTGGTAATGGTAACATGAACATCGTCCAATCACCCCTTGAGAGGCCCTTTCTTATCAGTAACTGCACCAGTGAGGAACGCTTCCAAAAGCTCTCCAGATACAGGAATAAGAGGACAAAGAGGAATTTTGGGAGGAAAATCAAGTATGCTTGCAGGAAGGCTCTTGCTGACAGTCAGCCAAGAATCCGTGGAAGATTTGCAAGGACTGAAGAATGTGATGTGAAGAGGGAATGA 840 0.4321 MYAETGLLFPYLNNISHELHQLEEYCKTQKSNASILDDFIQSSAMSEYDLAAEGDLFKAPEPIIEEPMMDLDLMTAAISMMSRGEDVSSQGLKSTDIDILQNDQFFNEVFYECKKDLLEKAAIEPPLSEILEIKVPLMNIDENSIQENKPLPDMQLAKSVSSGSLDWMRGAAMRPAFIDIPEIDFNAVYGMRRSFSEGDIKTLGNGNMNIVQSPLERPFLISNCTSEERFQKLSRYRNKRTKRNFGRKIKYACRKALADSQPRIRGRFARTEECDVKRE 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0440 279 PANTHER CCT MOTIF FAMILY PROTEIN 28 277 - -
Aed10g0440 279 ProSiteProfiles CCT domain profile. 229 271 IPR010402 GO:0005515
Aed10g0440 279 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 28 277 - -
Aed10g0440 279 Pfam CCT motif 229 271 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0440 Aed-Chr10 3617261 3623210 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0440 225 270 C2C2-CO-like Transcription Factor Family AT5G24930 54.348 6.74e-09 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aed10g0440 CCT 3.3e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0440 - - gmx:100814332 500.745