LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed10g0438	ATGGCGCTTTGTAGAGCTGGGCCAAACCCAATTCCGGGAAGCTTAGCTTATTCAGCTCAAAATTTGTCGACAAAACTTTTTGTACCTTCTCCCCTTCGTTTTACCGGACAGTTCTCCAATTTGGTTAGGAGAAAGCGCAAGGGAGTATGCTGCTCTTCATTAAGGAATGCTGAATCTGCATCTTCTAAGGAGTCACAGGAAGATGCTCCAAGTACTTTTTCAGTTTGTTCAGAGGAGGAAACAGATCATGTTATACGGTTCAAAATGTCGGACTTTAAGATTTTAGACTCTGTTAGTGTTGGCCTTGGCGGGAGGCCGGACGAGGTAGTTTTTGAAGGCACGGTAGAGGATAGTGGTAGCCCTTTGTATAACACAAGAGTTGTACTTCGACAGCTTTCTAGTACACAAGCTCAGCGTCGAGGGAAACGAGCAATAGAGGTATTGAAGAAGCTAGTTCGGCGTAAACTGCTGTATCATTCTTACTCAATGCAAGTTCATGGTTATATCTCTTTGCTTGCAAGTGGTGCTAGTGGTTCATTTATCCTAGTACACGGGTATCATGGTAGTTTTTCTTTGAGACACTGGCTTCAACAGTCGGATTGGCTTCCAACTTTAGAGGCTACTCTTGCACTGGATGAAGAGTCTGTTAGGAAGGTAGGAGAAGATTCTACAGGAGGTCCTGCAGTTTCTAGGCAGTCACGACTTATTCGAATATTGATGAGGGATCTTCTTATTGGGGTAAATTACCTGCACAGTCACGGTCTTGCCCATACAGAGTTGAGACTGGAAAATGTTCATATAAGTCCAGTAGACAGACATATTAAAGTAGGTATATTGGGTAATGCTGCTGACTTTAACAAGGATGGTTCGAATGGAAGCTCTTTGGACAACCTGGACAGGCGTCAGATGATGATTGCATTTGACATGAGATGCATGGGCTTTATAATGGCTAAGATGGTAATGCGGGAACTTATGGATCCTTTGATTTTTGCAAAGTTCAAATCGTTCCTCACAAAGGGGTATGATCCTTCATGTCTGCGAGAGCTTATGTTGGAAATCCTTGGCAGAAGTTCCCCTAATGGAAATGCTGGATTACAAATACTTGATAGGAACTGGGGAGCTGGTTGGCACCTTTTATCTTTATTGCTTGCAACTAAACCTTCTCAAAGGATTAGTTGCTTGGATGCTCTTAGACACCCATTCCTTTGTGGGCCAAGATGGCGAGTAGTCCCATCAATGGATATTATCAGATGGGGTCTGGGTTCTACTGCAATGCGTATTAGTGAGGAGTACATTTATCGTGAGCCTCAGCGAAGCAGGCTTGCCCACTTCATTGACTTAATGGAGATGTTGAATCCCCATCCAAAGCCAAGGAACTGGCTGGAGCTGCTTCCAGGCAAATGGCGTCTATTATATTGCACAGGGAAGCATGTAGGCCTGACCCTCCGCCAACCTCCTCTCCGTGTACTCGTTGGTGATGTACATTTAACTGTGACAAGAGAATCAAAATTGAAAGCTAATCTTTCATTCGACTCTGACATTGGATTCTCTGTCATGGTTGGTCAGGACTGGCCTCATGACAAAGCTGGTAAGAGTGGAAGATTGCAGGTGAATTCTTCATTTACACTAAGATCCGGGAGACGGCTATATCTGAAGCAAGACAAGACCACAGAAAAGTTCATCTTTGGCCCTTCCAGCAGCAATGTGGAGGCTTTAGCTCAGAAATTTAAGGGCAAGAAGTGGAGAAAAATAGTCCCTTTCAAGGAGTTTCCATCAAGTCTTCCAGCAGCCAAGCTTGCATCTGGTGATATCAATGTGACAATCAATCTTGATGATCCATTAAATCGAAGCGTTGATACTGCAAGAAATGTTCTGCAAGAACTAAGAACACAAATTCCCCCAGAAATATTTGATTTGTCAAAGCTTGTGTGTGGAACTTATGTGGACTCAAGGCTGCTTGTGCTACGAGGGGTTAATGGATCAGCACTCCTATTTACAAGGTCTTTTGTGGATAGAAACGGTTCTAAATAG	2031	0.4362	MALCRAGPNPIPGSLAYSAQNLSTKLFVPSPLRFTGQFSNLVRRKRKGVCCSSLRNAESASSKESQEDAPSTFSVCSEEETDHVIRFKMSDFKILDSVSVGLGGRPDEVVFEGTVEDSGSPLYNTRVVLRQLSSTQAQRRGKRAIEVLKKLVRRKLLYHSYSMQVHGYISLLASGASGSFILVHGYHGSFSLRHWLQQSDWLPTLEATLALDEESVRKVGEDSTGGPAVSRQSRLIRILMRDLLIGVNYLHSHGLAHTELRLENVHISPVDRHIKVGILGNAADFNKDGSNGSSLDNLDRRQMMIAFDMRCMGFIMAKMVMRELMDPLIFAKFKSFLTKGYDPSCLRELMLEILGRSSPNGNAGLQILDRNWGAGWHLLSLLLATKPSQRISCLDALRHPFLCGPRWRVVPSMDIIRWGLGSTAMRISEEYIYREPQRSRLAHFIDLMEMLNPHPKPRNWLELLPGKWRLLYCTGKHVGLTLRQPPLRVLVGDVHLTVTRESKLKANLSFDSDIGFSVMVGQDWPHDKAGKSGRLQVNSSFTLRSGRRLYLKQDKTTEKFIFGPSSSNVEALAQKFKGKKWRKIVPFKEFPSSLPAAKLASGDINVTINLDDPLNRSVDTARNVLQELRTQIPPEIFDLSKLVCGTYVDSRLLVLRGVNGSALLFTRSFVDRNGSK	676

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed10g0438	676	ProSiteProfiles	Protein kinase domain profile.	92	402	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aed10g0438	676	Gene3D	Transferase(Phosphotransferase) domain 1	228	404	-	-
	Aed10g0438	676	PANTHER	PLASTID-LIPID-ASSOCIATED PROTEIN 14, CHLOROPLASTIC-RELATED	62	669	-	-
	Aed10g0438	676	Pfam	PAP_fibrillin	437	663	IPR006843	-
	Aed10g0438	676	PANTHER	CELL DIVISION PROTEIN KINASE	62	669	-	-
	Aed10g0438	676	SMART	serkin_6	92	402	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aed10g0438	676	SUPERFAMILY	Protein kinase-like (PK-like)	89	414	IPR011009	-

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	Group-Pl-4	Aed10g0438		PAP_fibrillin	3.1e-08	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed10g0438	-		-	gmx:100809306	1238.02