Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0435 ATGAGCAAGTTTCATTGGTGTGTAAAGCAAGCAAAGATAAGATATTTAATAATTAAATACTGTTTGTTAACACCCAAACCCAAAGTCAACACAACACAACTGATTTTCAATTCCATCCCAAACATGAAGAAGATCTTTTTCATACTCGCGCTCTTGATCATCTTGAACCCGCACCTGATAGCACTGGGAAGCATAGAAACATGTTTAGACAGCGTTTGCCACACTAACGAGCCAGTTATCCGATTCCCGTTCCGCATAGAGGGAAAGCAAGAAGATTCATGCGGGCACCCAGGGTTCAGCGTATCCTGCACCCCCAACGGCCAAACACTACTTAACCTATCTCACTGGGGCCAACTCAGAATCCAAAGAATAAACTACGCTGCACAGCAACTATGGCTAAACGACCCCAACAACTGCCTCCCCAAACTCCTCCTCTCTCTCAACCTCTCCGCCTCTCCCTTCGACGCCGTTTACCGCCAACAATTCAGCTTCTTCAACTGCTCCTTCAACGTGGAGTACCTCGTCCGTCGCTACCGCCCCATAAACTGTCTCAGCGACTCTCCCAAGTACGTCGTTTTCGCCACGCCGCCTTCTTCGACCGTGTTTGGACACTTGTCGTCCGTCTGTCAGTTCGTTGCGATGGTGGAGGTTCCCGTCCAGTCGCCGTTTTACGATCGTGTGATGTCGTCGGAGCTCCGCGACGATCTCCGACTGTCGTGGGACTCGCCGGCGTGCGGAAGGTGCGAATCGCACGGTGACCGCTGCGGCTTCAAGAGCAACAACACTTTTGACCTTGACTGTTCCCATATCCCTTCAAAAGGGATATCCCGCGGGGCGCGTTACGCCATAGCGATATGCATAGGGGTGCCAGCTCTGGTGTGCTCCATGGGAGTATTGAGTTGCATCTGCAGCTGGTTGAGAATCGGCACCCACGAGATGGTGCCAGATTTTGAGGCTCTACCGGGCTCGCGGTCCACTACAGTAACGGGCCTCGACAGGCCCACGATTGAATCGTACCCGAAAATAGTTATAGGGGAGAACAGACGGTTACCAAAGAAGGGTGAGAAGACATGCTCAATATGCCTCTCGGAGTACATGCCGAAAGAGACGTACTTCCTTGACGAAACTGCACCCGCCACGTGCAACGCGAGGCCGTGCATTATTTCTTCTTCCCCAGTCGTGAAAGGAAAATACTACTGTACTGAAAGTGAAACAATAGTGGCTCGTGGACGTGGTGATCGAATCGCATCTACAACAGCAGTTTCAGGCATTTCGAGTTGCACAACAACAGCGATGGCCGAGGTTGTTACTTCAGCTCCAGGGAAAGTGTTAATGACCGGTGGCTACCTCATCTTGGAGCGACCCAATGCAGGACTTGTCCTCAGCACAAACGCTCGCTTTTACGCCATCATTAAACCCATTCACCACGAAATCAAACCCGATTCCTGGGCATGGGCATGGACAGATGTCAGATTAACCTCTCCCCAGCTCTCCAGAGAAGCCCTCTACAAACTCTCACTCAAAAATCTCGCCATCCAAACCGTTTCCCCAAGTGATACGAGAAATCCTTTTGTAGAATATGTCGTGCAGTATTCCGCGGCGGCGGCTTACGCGACGCTTGACCAGAGTAAAAAGGAGAAGTTGCACAAACTACTTTTACATGGTCTTGACATTACAATTTTGGGTGGCAATGATTTTTATTCATATAGGAATGAGATTGAGAAACGGGGACTTCCTTTGACATCGGACTCGTTGGCCACCATTCCGCCTTTTTCCTCCATTACCTTCAATACTGATGATGCTGATGGAGGAAATTGCAAGCCTGAAGTGGCTAAAACTGGTTTGGGCTCGTCTGCAGCGATGACCACGGCTGTAGTTGCTGCTTTACTTCATTACCTGGATGTTGTAAAGCTTTCCTCTTCGAAAGATCAGCAGGAAAGGAAGGATGTTGCGGATCTTGATATGGTGCATAAAATAGCTCAAACTGCACACTGTATTGCACAGGGGAAAGTAGGCAGTGGGTTTGATGTTAGTTCAGCTGTGTATGGCAGTCAGCGCTATGTTCGGTTTTCACCAGAAGTGATTTCTTCCACTCAGGTTGCAGATAAAGCAGTGCCTTTAAAAGATGGTATCACTGAAATTATAAAAGGAAATTGGGACCATGACACGATTGAGTTCTCTTTACCACCTTTGATGACTCTTTTACTAGGAGAACCTGGAACTGGTGGATCATCCACGCCATCAATGGTTGGTGCTGTTAAAAAATGGCAAAAGTCTGACCCTCAGAAATCCCTGGACACATGGACAAGATTGTCAGAAGCAAATTCAACATTGGAAATGCAACTAAACTTGTTAAGCAAATTAGCAAAGGAACAATGGAATGCATATAAATCTGTGATTGACAGCTGCAGCCTGCTCAGATCAGACAAGTGGATAGAACAAGCTTCTGAACCTAACAAGGAAGCAGTTATTAAAGCACTGCTAGGTGCTAGAGAAGCCATGCTGGGGATTAGATATCATATGCGCCTAATGGGCGAGGCTGCAGGTGTTCCAATTGAACCAGAATCACAGACACAACTTTTAGATGCTACAATGAACTTGGAAGGAGTATTGTTGGCTGGAGTGCCAGGGGCAGGAGGATTTGATGCAATCTTTGCTGTTACTTTGGGAGATACGAGCAGCAATGTGACAAAAGTATGGAGTTCACTCAATGTCCTTGCCTTGTTGGTTAAAGAAGATCCTTGTGGTGTTTGTTTAGAAAAGGCTGACCCACGAACCAATGAAATCACATCAGCTGTGTCTTCAATTCATATTGAATAA 2820 0.4755 MSKFHWCVKQAKIRYLIIKYCLLTPKPKVNTTQLIFNSIPNMKKIFFILALLIILNPHLIALGSIETCLDSVCHTNEPVIRFPFRIEGKQEDSCGHPGFSVSCTPNGQTLLNLSHWGQLRIQRINYAAQQLWLNDPNNCLPKLLLSLNLSASPFDAVYRQQFSFFNCSFNVEYLVRRYRPINCLSDSPKYVVFATPPSSTVFGHLSSVCQFVAMVEVPVQSPFYDRVMSSELRDDLRLSWDSPACGRCESHGDRCGFKSNNTFDLDCSHIPSKGISRGARYAIAICIGVPALVCSMGVLSCICSWLRIGTHEMVPDFEALPGSRSTTVTGLDRPTIESYPKIVIGENRRLPKKGEKTCSICLSEYMPKETYFLDETAPATCNARPCIISSSPVVKGKYYCTESETIVARGRGDRIASTTAVSGISSCTTTAMAEVVTSAPGKVLMTGGYLILERPNAGLVLSTNARFYAIIKPIHHEIKPDSWAWAWTDVRLTSPQLSREALYKLSLKNLAIQTVSPSDTRNPFVEYVVQYSAAAAYATLDQSKKEKLHKLLLHGLDITILGGNDFYSYRNEIEKRGLPLTSDSLATIPPFSSITFNTDDADGGNCKPEVAKTGLGSSAAMTTAVVAALLHYLDVVKLSSSKDQQERKDVADLDMVHKIAQTAHCIAQGKVGSGFDVSSAVYGSQRYVRFSPEVISSTQVADKAVPLKDGITEIIKGNWDHDTIEFSLPPLMTLLLGEPGTGGSSTPSMVGAVKKWQKSDPQKSLDTWTRLSEANSTLEMQLNLLSKLAKEQWNAYKSVIDSCSLLRSDKWIEQASEPNKEAVIKALLGAREAMLGIRYHMRLMGEAAGVPIEPESQTQLLDATMNLEGVLLAGVPGAGGFDAIFAVTLGDTSSNVTKVWSSLNVLALLVKEDPCGVCLEKADPRTNEITSAVSSIHIE 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0435 939 Pfam Wall-associated receptor kinase galacturonan-binding 68 135 IPR025287 GO:0030247
Aed10g0435 939 PANTHER - 435 938 - -
Aed10g0435 939 Pfam GHMP kinases C terminal 834 901 IPR013750 -
Aed10g0435 939 TIGRFAM Pmev_kin_ERG8: phosphomevalonate kinase 436 926 IPR016005 GO:0004631
Aed10g0435 939 Pfam Wall-associated receptor kinase C-terminal 204 267 IPR032872 -
Aed10g0435 939 Pfam GHMP kinases N terminal domain 606 684 IPR006204 GO:0005524
Aed10g0435 939 Gene3D - 431 738 IPR014721 -
Aed10g0435 939 SUPERFAMILY Ribosomal protein S5 domain 2-like 434 694 IPR020568 -
Aed10g0435 939 PANTHER - 435 938 IPR035102 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0435 Aed-Chr10 3543925 3564474 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0435 66 370 C3H Transcription Factor Family AT2G46495 34.194 9.86e-43 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0435 K00938 - gmx:100810373 885.56