Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0428 ATGAAATATTTATTTTTTCTCCTGGTCACTTTCAAGATTATCAAGAGAAAATTTACACAGCTACGTGAGGCCATGGGGTTTCAAACATCACATAGCACTAAACGGATACCACATCAAATTTTCAAAGCAAAGGAGGACTCAATTGATGCTCATCATGAAAACTCATTAATTCGAAGTACCACACTGAGTACCCAAACCAATTCCAACTTCACTATCTCTGCCTATGATTCATGGGTGGTACGGCACCCTTGTGCATTGAACACTTTTGAAAGGTTGATGAAAGATGCCACTGGGAAGAGGATCATCGTTTTTTTGGACTATGATGGTACCTTATCACCAATTGTAAATGACCCTGATCGCGCTTTCATTTCCGATGAGATGCGTGCAGCTGTATATGAAGTTGCTACATATTTTCCAACAGCAATAATTAGTGGAAGAAGTAGAGATAAGGTAAAAGATTTCGTGAAGTTAAATAATTTGTATTATGCTGGAAGCCACGGCATGGACATAATGGCGCCATCCATGCCAGTTACATCTTCTGAAAGCAAGCATTTTGACATTGCCGGTAACACAAATGACATTGAGGTTCCCTTTCAACCAGCGAAGAAGTTTTTGCCTGCAATTAGAGAGATAATAAGAGTAGTAAAGAATGAAGTAAAGGAAATAAAAGGAGCAATGGTAGAGGACAATGGATTCTGCCTCTCTGTACATTTCAGGCAGGTCCAAGAAAAGGATTATGACGTTTTGGAACAGAAAGTGAAGGCTGTGCTTGAAAATAATCCACAGTTTTGCTTAACAGAGGGTAAAAAGGTTATGGAAATAAGGCCATCTATAAAGTGGAACAAAGGAAATGCTGTAGAATATTTTCTTGACACATTAGGATTAAGCAATTGCAATGATATCCTTCCTGTGTATATTGGCGATGATAGAACTGATGAAGATGCTTTTAAGGTCCTACAGAGTAGAGAGCAAGGTTATCCAATTATAGTGTCTTCAATTCCAAGAGAAACTAACGCTTCATACTCTTTGCGTGACCCATCTGAAGTTCTAGTCTTTTTGTCACGGTTGGCAAAATGGAGGAAAAATTCTTACTAA 1095 0.3845 MKYLFFLLVTFKIIKRKFTQLREAMGFQTSHSTKRIPHQIFKAKEDSIDAHHENSLIRSTTLSTQTNSNFTISAYDSWVVRHPCALNTFERLMKDATGKRIIVFLDYDGTLSPIVNDPDRAFISDEMRAAVYEVATYFPTAIISGRSRDKVKDFVKLNNLYYAGSHGMDIMAPSMPVTSSESKHFDIAGNTNDIEVPFQPAKKFLPAIREIIRVVKNEVKEIKGAMVEDNGFCLSVHFRQVQEKDYDVLEQKVKAVLENNPQFCLTEGKKVMEIRPSIKWNKGNAVEYFLDTLGLSNCNDILPVYIGDDRTDEDAFKVLQSREQGYPIIVSSIPRETNASYSLRDPSEVLVFLSRLAKWRKNSY 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0428 364 CDD HAD_TPP 103 349 - -
Aed10g0428 364 Pfam Trehalose-phosphatase 104 347 IPR003337 GO:0003824|GO:0005992
Aed10g0428 364 Coils Coil 239 259 - -
Aed10g0428 364 TIGRFAM T6PP: trehalose-phosphatase 98 358 IPR003337 GO:0003824|GO:0005992
Aed10g0428 364 Gene3D - 201 364 IPR023214 -
Aed10g0428 364 Gene3D - 101 186 IPR023214 -
Aed10g0428 364 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 102 320 IPR006379 -
Aed10g0428 364 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 62 363 - -
Aed10g0428 364 SUPERFAMILY HAD-like 102 361 IPR036412 -
Aed10g0428 364 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 62 363 IPR044651 GO:0004805|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0428 Aed-Chr10 3461535 3463783 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0428 99 357 Trehalose Biosynthesis Gene Families AT1G70290 25.455 3.13e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0428 K01087 - gmx:100809194 659.062