Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0421 ATGGAGAACATGGGAGACCCAAAGAGCATCATAAACGAGCTGTTACAAGGTTTGGAGTTGGCAAGGCAGCTCCAAGTGTATCTCCACATGCCATCTTCGTCACAAGAAACTCGTGACCTCTTGATCCAGAAGATCATTTCCACATTTGAAAAGGTACTCGAAATGGTCAATTGGAAAGGGCCAGCAGCGGCTGAAGGAGCTGCTATTCGAATGTCAGACTCACCTCTGAGCACTAGCCCCCGCAGTGAAGACTCCGATAGAGATTTCAAGGACCAGGACCCAAATGCTTTCAAGAAGAGGAACACTTTGCCAAGATGGACAAAGCAGATTCGAGTTACACCAGGAATGGGGGTAGAAGGGCCTCTCGATGATGGATATAGTTGGAGAAAATATGGCCAGAAAGACATCCTCGGAGCCTTGTACCCCAGGGGATATTATAGATGCACCCACAGAAATGTTCAAGGCTGCATGGCAACAAAGCAAGTGCAAAGATCCGATGAAGACTCCACTATTTTTGAAATCACTTACCGAGGAAAGCACACATGCACAATGGCCAACAACGTTGGTTCATCCTCAATTATTCCACCAGAAAACCAAGAACCAAGTTTGAACAACAACACAAATCTTCAGCATCAGCAGAATATCCTGCAAAGCCTTGAGCATCAACCAAATGACCTACTTTTGAGCCTGCGGAAAGAGTTGAGAGTCCAAACAGAGAACCTAGATTCCCCTGACCAATCATCATTCGCTCCATTCCGTTTCCCTTTATCAACAAACATCAAAACTGAAAGCCAACCACTTTTCCCTTCCCCTGTTCTTGAAAACTTCACTTCTCCTTCTTATATGTCCCCTGCTGCATCAGGAATAAGCCACTTTTCGGTTTCTCCAACTGGGGTGAACAGCTTTGGATCAGGGAACCCAAATTTGGCAAATTCTCACTCTCACACTCAGATCAATGACATGATCCCAGCCACTACTACTTCAGCTCCAAACTCATCAACCACTGGTTTAGAGTTTCCTTTGGACCAGTTTGAATTTGATGGCCAGAACTTCACTTTCGATAACCCACGATTCTTCTCTTGA 1083 0.4534 MENMGDPKSIINELLQGLELARQLQVYLHMPSSSQETRDLLIQKIISTFEKVLEMVNWKGPAAAEGAAIRMSDSPLSTSPRSEDSDRDFKDQDPNAFKKRNTLPRWTKQIRVTPGMGVEGPLDDGYSWRKYGQKDILGALYPRGYYRCTHRNVQGCMATKQVQRSDEDSTIFEITYRGKHTCTMANNVGSSSIIPPENQEPSLNNNTNLQHQQNILQSLEHQPNDLLLSLRKELRVQTENLDSPDQSSFAPFRFPLSTNIKTESQPLFPSPVLENFTSPSYMSPAASGISHFSVSPTGVNSFGSGNPNLANSHSHTQINDMIPATTTSAPNSSTTGLEFPLDQFEFDGQNFTFDNPRFFS 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0421 360 Gene3D WRKY domain 115 185 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed10g0421 360 SMART WRKY_cls 122 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed10g0421 360 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED 1 358 - -
Aed10g0421 360 Pfam WRKY DNA -binding domain 123 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed10g0421 360 MobiDBLite consensus disorder prediction 80 98 - -
Aed10g0421 360 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 358 IPR044810 GO:0003700
Aed10g0421 360 SUPERFAMILY WRKY DNA-binding domain 121 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed10g0421 360 MobiDBLite consensus disorder prediction 69 102 - -
Aed10g0421 360 ProSiteProfiles WRKY domain profile. 117 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0421 Aed-Chr10 3405576 3407999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0421 8 201 WRKY Transcription Factor Family AT5G24110 46.970 2.22e-54 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed10g0421 WRKY 2.4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0421 - - gmx:100776906 594.734