Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0414 ATGGACAAGAAGTTGCTGCCCCTCTTGTTCATTTTTTCAGCAGTGTTGTTGGTTAGTGTTGTGGCTGAACCGCTGGAAGATAAACAAGCTTTGCTTGATTTCCTTGACAACATGAGTCACTCTCCTCATGTCAACTGGGATGATAACACTTCAGTTTGCCAAAGCTGGAGAGGAGTGATTTGCAACTCCGACAACTCCCGAGTCATCGAACTTCGATTGCCGGGAGCCGGGTTGAGTGGTCCAATCCCTCCCAACACTCTCAGTCGCCTCTCGGCTCTTGAGATTGTTAGTCTTAGATCAAATGGTATAAGTGGCTCTTTCCCTGATGGTTTCTCTGAGCTGAAAAACTTGACCAGCCTCTATTTTCAATCCAACAGGTTTTCTGGGCCGTTGCCATTGGATTTTTCAGTTTGGAACAATCTCAGTGTTGTCAATTTATCCAATAATTTTTTCAATGGGAGCATCCCTTTTTCAATTTCTAATATGACTCATCTCACTTCATTAGTCCTTGCAAACAACTCTCTTTCGGGTCAGATTCCTGATCTCAACATTCCTAGCCTGCATGAGCTGAATTTATCCAACAATAACCTTAGTGGTGTTGTGCCTAAATCCCTTCTTAGATTTCCTAGTTCGGCCTTTGCTGGTAACAATCTTACATCAGCAGATGCACTCCCTCCAGCTTTTCCTTTGGAGCCTCCCACATCCCTTCCAGCAAAGAAATCCAAAAGACTCAGTGAACCTGCATTGTTGGGTATCATCATTGGTGCTTGTGTTCTGGGGTTTGTGGTGGTTGCAGGTTTCATGATTGTGTGCTGCTATCAGAATGCAGATGTGGATGTGCAAGCAGTGAAATCTAAGAAAAAACAAGCCTCACTGAAAACAGAATCTTCTGGAAGTCAAGACAAGAACCACAAAATTGTCTTCTTTGAGGGTTGCAATCTTGCATTTGATCTAGAGGATCTGTTGAGAGCTTCTGCTGAGATTCTTGGAAAGGGTACCTTTGGCATGACATATAAGGCTGCTCTAGAGGATGCAACCACTGTGGTGGTGAAGAGGTTGAAGGAGGTAACAGTTGGAAAACGAGACTTTGAACAGCAGATGGAGGTGGTGGGGAAAATTAAGCACGAAAATGTGGATGCAGTGAGGGCATATTATTATTCAAAGGAGGAGAAACTCATAGTATATGATTACTATCAACAAGGCAGCGTTTCTGCATTGTTACATGGCAAAGGAGGGGAAGGCAGAAGTTCTTTAGACTGGGATGGCCGCTTGAGAATAGCAATTGGTGCAGCCAGAGGCATTGCTCACATCCACGCTCAACTTGGAGGGAAACTCGCTCATGGAAACATAAAAGCCTCAAACATCTTCCTCAACTCACAAGGATATGGATGCATATCTGATATTGGCTTGACAACATTGATGAGTCCAATACCCCTGCCAGCAATGAGAGCAACCGGATACCGTGCACCGGAAGTAACAGACACGCGCAAAGCAACTCATGCATCTGATGTGTACAGCTTTGGGGTGATGCTACTTGAGCTCCTGACTGGTAAATCCCCTATAAACAGCACAGAAGGTGAGCAGGTTATCCACTTGGTTAGATGGGTGAATTCTGTGGTTAGAGAGGAGTGGACTGCAGAAGTGTTTGATGTAGAGCTATTGAGGTATCCAAACATTGAGGAAGAAATGGTGGGAATGCTTCAAATAGGGATGGCTTGTGCTGCAAGAATACCTGATCAGAGACCAAAGATGCCTGATGTGGTGAGAATGATGGAGGAGATTCGTCGTGTAAATACGCCAAATCCACCATCCACTGAGTCTAGATCGGAAGTTTCTACACCCACTCCACGTGCAGTTGACATTCCTTCTAGTTCTACCTCTGCTCAACAATGA 1893 0.4474 MDKKLLPLLFIFSAVLLVSVVAEPLEDKQALLDFLDNMSHSPHVNWDDNTSVCQSWRGVICNSDNSRVIELRLPGAGLSGPIPPNTLSRLSALEIVSLRSNGISGSFPDGFSELKNLTSLYFQSNRFSGPLPLDFSVWNNLSVVNLSNNFFNGSIPFSISNMTHLTSLVLANNSLSGQIPDLNIPSLHELNLSNNNLSGVVPKSLLRFPSSAFAGNNLTSADALPPAFPLEPPTSLPAKKSKRLSEPALLGIIIGACVLGFVVVAGFMIVCCYQNADVDVQAVKSKKKQASLKTESSGSQDKNHKIVFFEGCNLAFDLEDLLRASAEILGKGTFGMTYKAALEDATTVVVKRLKEVTVGKRDFEQQMEVVGKIKHENVDAVRAYYYSKEEKLIVYDYYQQGSVSALLHGKGGEGRSSLDWDGRLRIAIGAARGIAHIHAQLGGKLAHGNIKASNIFLNSQGYGCISDIGLTTLMSPIPLPAMRATGYRAPEVTDTRKATHASDVYSFGVMLLELLTGKSPINSTEGEQVIHLVRWVNSVVREEWTAEVFDVELLRYPNIEEEMVGMLQIGMACAARIPDQRPKMPDVVRMMEEIRRVNTPNPPSTESRSEVSTPTPRAVDIPSSSTSAQQ 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0414 630 Gene3D Phosphorylase Kinase; domain 1 287 397 - -
Aed10g0414 630 ProSitePatterns Protein kinases ATP-binding region signature. 329 360 IPR017441 GO:0005524
Aed10g0414 630 Gene3D Transferase(Phosphotransferase) domain 1 399 611 - -
Aed10g0414 630 SUPERFAMILY Protein kinase-like (PK-like) 327 592 IPR011009 -
Aed10g0414 630 ProSiteProfiles Leucine-rich repeat profile. 186 207 IPR001611 GO:0005515
Aed10g0414 630 ProSiteProfiles Protein kinase domain profile. 323 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0414 630 PANTHER OS05G0588300 PROTEIN 12 620 - -
Aed10g0414 630 PANTHER LRR RECEPTOR-LIKE KINASE 12 620 - -
Aed10g0414 630 MobiDBLite consensus disorder prediction 593 630 - -
Aed10g0414 630 SUPERFAMILY L domain-like 40 208 - -
Aed10g0414 630 MobiDBLite consensus disorder prediction 598 630 - -
Aed10g0414 630 Gene3D Ribonuclease Inhibitor 25 237 IPR032675 -
Aed10g0414 630 Pfam Leucine rich repeat N-terminal domain 26 62 IPR013210 -
Aed10g0414 630 Pfam Protein tyrosine and serine/threonine kinase 327 539 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0414 Aed-Chr10 3338779 3342760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0414 22 615 Receptor kinase-like Gene Family AT4G23740 56.311 0.0 680
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aed10g0414 PK_Tyr_Ser-Thr 2.5e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0414 - - gmx:100813065 1097.03