Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed10g0409 | ATGTCAAGCAATGCATTAACTCTTTTTATCTTGTTTCTTAACATCTCCTTGTGTCCATCAATCTCTGCTCTGAACCAAGAAGGTCTCTCTTTACTTTCATGGCTTTCAACCTTCAACTCATCCAACTCTGCCTTCTCTTCCTGGGATCCAACACACAAAGATCCTTGTACATGGGACTACATAGCATGTTCCAAAGAAGGGTTTGTCTCAGAGATAATAGTAACATCCATTGATCTACGTAGCAGCTTCCCCTCACAGCTCCATTCTTTTGGCCACCTCACCACTCTTGTCATCTCAAATGGAAATCTCACCGGTCATATTCCAAGTTCAGTGGGAAACTTGTCCTCTTTGGTCACTTTGGACCTTAGCTTCAATGCTTTAACAGGAAGCATTCCTGAAGAGATAGGAATGCTGTCCAAGCTGCAGTTGTTGTTGCTGAATTCAAATTCCTTGCAAGGTGGAATTCCAGCCACAATTGGAAACTGTTCAAGGCTTCAGCATGTGGCACTTTTTGACAACCAGCTCTCTGGAATGATACCTGGAGAAATAGGCCAGTTGAGTGCTCTTGAAACACTAAGAGCAGGTGGAAATCCAGGTATTCATGGTGAAATTCCAATGCAGATATCAGAGTGCAAGGCCCTTGTTTTTCTAGGACTCGCGGTTACCAGTGTTTCGGGGGAGATTCCACCAAGTATAGGAGAGCTTAAGAATCTGAAGACACTTTCAGTCTACACAGCACATCTCACAGGTCATATCCCAGCAGAGATTCAGAACTGTTCAGCCTTGGAGGATTTGTTTCTGTATGAGAACCAGCTTTCTGGAAGTATTCCTTATGAATTGGGCTCCATGCAAAGCCTCAAGAGGGTGTTACTGTGGCAGAACAATTTAACTGGAACCATTCCAGAAAGTCTTGGGAACTGTACAAATCTCAAGGTTATAGATTTCTCTTTGAATTCTTTGGGGGGTCAGATACCTGTGACTCTCAGTAGTCTACTCTTGTTGGAGGAGTTTCTTTTGTCTGATAATAATATTTATGGAGATATACCTTCCTATGTTGGAAACTTTTCCAGGCTGAAGCAAATTGAATTGGATAACAACAAATTCTCTGGGGAGATTCCACCTGTTATGGGGAAACTGAAGGAACTCACACTCTTCTATGCATGGCAGAATCAACTGAATGGAATTATACCAACAGAACTATCCAACTGTGAGAAACTTGAAGCACTTGATCTTTCACACAATTTCCTCACTGGCTCCATCCCAAGTTCACTATTTCATCTACGGAATTTGACTCAGTTGTTGCTGATATCAAACAGACTTTCAGGAACCATTCCTTCCTCATTAAAATTCCTACTTGGCCTTAATGTCTTGGATCTTTCTGCAAACAGAATAACCGGAAGCATTCCCGGGAATTTTGGCAAGCTTACATCTCTAAATAAGTTGATTCTGAGTGGAAACCTTATCTCTGGTGTGATCCCTGGGACACTGGGGCTGTGTAAGGCTTTGCAGTTGCTGGATATAAGTAACAATAGGATCACTGGTTCTATTCCTGATGAGATTGGTTATTTGCAAGGATTAGATATCCTCTTGAACTTGAGCTGGAATTCTCTTACTGGTCCCATTCCAGATACCTTCTCAAATCTCTCAAAACTATCCATCTTGGATATCTCTCACAACAAGCTCACAGGTCTACTCACAGTTCTGGTTAATCTTGACAATCTTGTGTCTCTAAATGTCTCCTACAACAGCTTTTCTGGTTCTCTTCCCGACACAAAATTCTTCCGGGATCTACCTGCTGCTGCATTTGCTGGTAACCCTGACCTTTGCATTAGCAAGTGTCATGCAAGTGAAAATGGCCAAGGCTTCAAGTCAATAAGAAATGTTATTATCTACACTTTCCTCGGGGTTGTTTTGGTTTCTATTTGTGTCACTTTTGGAGTAATTTTAACTCTCAGGATTCAAGGGGGAAACTTTGGGAGGAATTTTGATGAAGGTGGTGAAATGGAATGGGCTTTCACTCCATTCCAAAAACTCAACTTCTCCATCAATGAGATTTTGACAAAGCTGTCAGAATCAAACATTGTGGGAAAGGGTTGCTCAGGAGTCGTTTACCGTGTGGAGACTCCAATGAAGCAGATAATTGCAGTGAAGAAGCTATGGCCTATAAAGAAAGAAGAGCCACCAGAGAGAGATCTATTTACTGCAGAAGTTCAGACCCTTGGATCAATAAGACATAAGAATATAGTGAGACTTTTGGGATGCTGTGACAATGGAAGAACTAGATTGCTCTTATTTGATTACATAAGCAATGGGAGTTTGTTCGGATTACTCCACGAAAATCGATTGTTCTTGGATTGGGATGCAAGGTATAAGATCATACTGGGAACAGCTCATGGTCTAGAATATCTTCATCATGATTGTATCCCTCCAATTGTCCACAGAGACATTAAGGCTAACAACATCTTGGTAGGTTCACAATTTGAAGCTTTTCTTGCTGACTTTGGCCTTGCAAAACTTGTGAGTTCCTCAGACTCAGAGTGTTCAGGAGCCTCTCATACAGTTGCAGGTTCTTATGGATACATAGCTCCTGGTGAGTAA | 2598 | 0.4169 | MSSNALTLFILFLNISLCPSISALNQEGLSLLSWLSTFNSSNSAFSSWDPTHKDPCTWDYIACSKEGFVSEIIVTSIDLRSSFPSQLHSFGHLTTLVISNGNLTGHIPSSVGNLSSLVTLDLSFNALTGSIPEEIGMLSKLQLLLLNSNSLQGGIPATIGNCSRLQHVALFDNQLSGMIPGEIGQLSALETLRAGGNPGIHGEIPMQISECKALVFLGLAVTSVSGEIPPSIGELKNLKTLSVYTAHLTGHIPAEIQNCSALEDLFLYENQLSGSIPYELGSMQSLKRVLLWQNNLTGTIPESLGNCTNLKVIDFSLNSLGGQIPVTLSSLLLLEEFLLSDNNIYGDIPSYVGNFSRLKQIELDNNKFSGEIPPVMGKLKELTLFYAWQNQLNGIIPTELSNCEKLEALDLSHNFLTGSIPSSLFHLRNLTQLLLISNRLSGTIPSSLKFLLGLNVLDLSANRITGSIPGNFGKLTSLNKLILSGNLISGVIPGTLGLCKALQLLDISNNRITGSIPDEIGYLQGLDILLNLSWNSLTGPIPDTFSNLSKLSILDISHNKLTGLLTVLVNLDNLVSLNVSYNSFSGSLPDTKFFRDLPAAAFAGNPDLCISKCHASENGQGFKSIRNVIIYTFLGVVLVSICVTFGVILTLRIQGGNFGRNFDEGGEMEWAFTPFQKLNFSINEILTKLSESNIVGKGCSGVVYRVETPMKQIIAVKKLWPIKKEEPPERDLFTAEVQTLGSIRHKNIVRLLGCCDNGRTRLLLFDYISNGSLFGLLHENRLFLDWDARYKIILGTAHGLEYLHHDCIPPIVHRDIKANNILVGSQFEAFLADFGLAKLVSSSDSECSGASHTVAGSYGYIAPGE | 865 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed10g0409 | 865 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 811 | 823 | IPR008271 | GO:0004672|GO:0006468 | |
Aed10g0409 | 865 | SMART | LRR_typ_2 | 138 | 162 | IPR003591 | - | |
Aed10g0409 | 865 | SMART | LRR_typ_2 | 114 | 137 | IPR003591 | - | |
Aed10g0409 | 865 | SMART | LRR_typ_2 | 403 | 427 | IPR003591 | - | |
Aed10g0409 | 865 | SMART | LRR_typ_2 | 283 | 307 | IPR003591 | - | |
Aed10g0409 | 865 | SMART | LRR_typ_2 | 451 | 474 | IPR003591 | - | |
Aed10g0409 | 865 | SMART | LRR_typ_2 | 548 | 570 | IPR003591 | - | |
Aed10g0409 | 865 | SMART | LRR_typ_2 | 571 | 604 | IPR003591 | - | |
Aed10g0409 | 865 | SMART | LRR_typ_2 | 475 | 498 | IPR003591 | - | |
Aed10g0409 | 865 | Gene3D | Ribonuclease Inhibitor | 23 | 199 | IPR032675 | - | |
Aed10g0409 | 865 | Pfam | Leucine rich repeat | 454 | 512 | IPR001611 | GO:0005515 | |
Aed10g0409 | 865 | Pfam | Leucine rich repeat | 530 | 583 | IPR001611 | GO:0005515 | |
Aed10g0409 | 865 | Pfam | Leucine rich repeat | 92 | 151 | IPR001611 | GO:0005515 | |
Aed10g0409 | 865 | ProSiteProfiles | Protein kinase domain profile. | 689 | 865 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aed10g0409 | 865 | Pfam | Leucine rich repeat N-terminal domain | 25 | 64 | IPR013210 | - | |
Aed10g0409 | 865 | Gene3D | Ribonuclease Inhibitor | 330 | 618 | IPR032675 | - | |
Aed10g0409 | 865 | PANTHER | LRR RECEPTOR-LIKE KINASE | 438 | 863 | - | - | |
Aed10g0409 | 865 | SUPERFAMILY | Protein kinase-like (PK-like) | 673 | 863 | IPR011009 | - | |
Aed10g0409 | 865 | ProSiteProfiles | Leucine-rich repeat profile. | 405 | 427 | IPR001611 | GO:0005515 | |
Aed10g0409 | 865 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED | 438 | 863 | - | - | |
Aed10g0409 | 865 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED | 3 | 446 | - | - | |
Aed10g0409 | 865 | SUPERFAMILY | L domain-like | 276 | 613 | - | - | |
Aed10g0409 | 865 | Pfam | Protein kinase domain | 691 | 863 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aed10g0409 | 865 | Pfam | Leucine Rich Repeat | 405 | 427 | IPR001611 | GO:0005515 | |
Aed10g0409 | 865 | PRINTS | Leucine-rich repeat signature | 548 | 561 | - | - | |
Aed10g0409 | 865 | PRINTS | Leucine-rich repeat signature | 406 | 419 | - | - | |
Aed10g0409 | 865 | SUPERFAMILY | RNI-like | 79 | 393 | - | - | |
Aed10g0409 | 865 | Gene3D | Transferase(Phosphotransferase) domain 1 | 768 | 864 | - | - | |
Aed10g0409 | 865 | PANTHER | LRR RECEPTOR-LIKE KINASE | 3 | 446 | - | - | |
Aed10g0409 | 865 | Gene3D | Ribonuclease Inhibitor | 217 | 329 | IPR032675 | - | |
Aed10g0409 | 865 | Gene3D | Phosphorylase Kinase; domain 1 | 665 | 767 | - | - | |
Aed10g0409 | 865 | SMART | serkin_6 | 689 | 865 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aed10g0409 | 865 | ProSitePatterns | Protein kinases ATP-binding region signature. | 695 | 723 | IPR017441 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed10g0409 | Aed-Chr10 | 3299315 | 3302879 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed10g0409 | 23 | 863 | Receptor kinase-like Gene Family | AT5G56040 | 45.022 | 0.0 | 732 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Aed10g0409 | Pkinase | 7.7e-32 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed10g0409 | - | - | gmx:100780101 | 958.362 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aed10g0409 | 10 | 3299315 | 3302879 | Aed10g0409 | 10 | 3299315 | 3302879 | ECH |