Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0401 ATGAAGGAATTGGGCGTGGTTGCAGTGTTGTTGTCAATAGAGTTTTTTGACGTGATCGTCTACACTGTAAGCAAAGCAGCGATGACGAAGGGCATGAATGACTTTGTGTTCGTCATGTATTCCAATGCATTCGCAACTTGCCTCCTTCTTCCCATAACCTTTCTCTTCTATAGTTACAGTGTTCAGATGCTCAGGTTTGTTGGGATAGGTTACAGCTCTCCTACTCTGGCCACTGCAATGTCTGATTTAATCCCTGCTTTTACCTTCATGCTTGCCATCCTCTTCAGGATGGAGAAATTGGATTGGAAAACTAATAGTACTCGAGCTAAGTCCATTGGCACATTGGTATCAATCACTGGAGCCTTGACAATTACTCTGTACAAAGGCCAGGCAATCATAAATAATCATCCATCTAATAAATTGTTTCCCAAAAAACTTGTTTCATCTGAGGAATTCGATTGGGTTATAGGGGCAGTGCTGCTAGCGGGTCATAGCTTTGTTCTCTCATTGTTGTTTATAGTTCAGACATGGATAATCAGAAATTACCCTTCAGAGCTTGTGATAGTGCTCACTCGCGGTATATTGGTTTCTGTGCTATCTGTTCCGGCTTCACTGATTTCAGTAACGGATACAAAAGCTTTGAGATTAGGATTTGATGTGAATTTGATAGCTATTGCATTGCAATCTCCACTGCTGAAAAGTGAAGATGGGGAAGTTGACACTTCCGTTTGTGGGAATGATAATGGCAGAGTTAGCTCAGGTTGGGTTAATCATACTGAGCAAAAAAGCCATGGCACAAGGAATGACCAATTTCATCTTCATCTTCTATTCCAACTCAATCGCTGCCCTCCTCCTTCTTCCCACTTCCCTCCTTATACACAGGCATTTGGGTACGCTGGGATTTACTACGGCTCAGCTACACTCAGCACATCCATGCTCAACCTCGTTCCTGGCTTTACTTTCATACTTGCTGTTCTTTTTAGAATGGAACAACTACATTGGAGAAAATTTAGCAGCCTAGCTAAATCATTGGGAACAATAGTATCAATTGCTGGTGCATTTATTGTGACTTTGTACAAGGGCCCTGCACTTTTGATGGGAGTATCATCTGCGAACTCATCTCAGCAGCCACTCATCTCAGAATATTCTAATTGGATACTGGCAGGATTATTTCTTGCAGCTGATTGTGTAATGGCTTCAGCATATATTATTTTACAGGCTTCTATTCTTAAGAAATATCCAGCAGAATTGATTGTTGTATTCTTTTATTGTTTCTTTGTGGCCATTCAATCTGCTGTGACCTGTTTGGTTGTGGAAAGAGACATCACTGCTTGGAGCTTGGAACCTAAGTTAAGTCTGATTGGTGCTACTGTGATTGTTGTTGGGTTTTATTCTGTATTATGGGGTAAAGCCAAAGACATTGAAGATGCTGTAGTGAGAAGCTTGGAATCAAGGGGCAAACAGACCCCCCTCTTGGAAGAAAACAGCCATGAAGACATACCAGGGCATTAG 1512 0.4167 MKELGVVAVLLSIEFFDVIVYTVSKAAMTKGMNDFVFVMYSNAFATCLLLPITFLFYSYSVQMLRFVGIGYSSPTLATAMSDLIPAFTFMLAILFRMEKLDWKTNSTRAKSIGTLVSITGALTITLYKGQAIINNHPSNKLFPKKLVSSEEFDWVIGAVLLAGHSFVLSLLFIVQTWIIRNYPSELVIVLTRGILVSVLSVPASLISVTDTKALRLGFDVNLIAIALQSPLLKSEDGEVDTSVCGNDNGRVSSGWVNHTEQKSHGTRNDQFHLHLLFQLNRCPPPSSHFPPYTQAFGYAGIYYGSATLSTSMLNLVPGFTFILAVLFRMEQLHWRKFSSLAKSLGTIVSIAGAFIVTLYKGPALLMGVSSANSSQQPLISEYSNWILAGLFLAADCVMASAYIILQASILKKYPAELIVVFFYCFFVAIQSAVTCLVVERDITAWSLEPKLSLIGATVIVVGFYSVLWGKAKDIEDAVVRSLESRGKQTPLLEENSHEDIPGH 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0401 503 PANTHER WAT1-RELATED PROTEIN 8 228 - -
Aed10g0401 503 PANTHER WAT1-RELATED PROTEIN 293 454 IPR030184 GO:0016021|GO:0022857
Aed10g0401 503 PANTHER WAT1-RELATED PROTEIN 293 454 - -
Aed10g0401 503 PANTHER WAT1-RELATED PROTEIN 8 228 IPR030184 GO:0016021|GO:0022857
Aed10g0401 503 PANTHER WAT1-RELATED PROTEIN 452 479 IPR030184 GO:0016021|GO:0022857
Aed10g0401 503 PANTHER WAT1-RELATED PROTEIN 452 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0401 Aed-Chr10 3257384 3262959 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0401 293 464 Nodulin-like Gene Family AT5G40240 42.373 3.22e-35 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0401 - - gmx:100781718 390.578