Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0395 ATGAAAAGTTGTTGGTTGTTGGTTGGGGTCTTGGTTTTGGTGGGGTGTGCCTGCATGTTGGGCACTGTTGGAGTAGAAGGGTACCCTGATGAGGATCTGATAGTGAGATTACCTGGCCAGCCCAATGTTGGCTTCAAGCAATATGCAGGGTATGTTGACATTGATGTCAAGCATGGGAGAAGCCTCTTCTACTATTTTGTGGAGGCTGAGAATGGCCATGACAAGAAGCCCCTCTCTCTTTGGCTCAATGGAGGCCCGGGATGTTCCTCCATTGGAGGAGGTGCCTTTACTGAGTTGGGTCCCTTTTATCCCAAAGGTGATGGACGTGGTCTCCGAAGAAATTCAATGTCTTGGAATAGAGCCAATGATATGCTTCTGTTCTTGCTGAAATGGTATGAGAAGTTTCCTTCCTACAGATCAAGGGAGCTGTTCCTTACTGGGGAAAGCTATGCAGGACATTATATACCACAGCTAGCAAATGTTCTTTTGGACCACAATGCTCATTCAACTGGTTTCAAATTCAATATTAAAGGAGTTGCTATTGGAAATCCACTTCTGAAACTTGATCGTGATGCACAAGCAACATATGAATACTTCTGGTCACATGGAATGGTTTCTGATGAAGTTGGCCTTGCCATTACCAATGATTGCGATTTTGATGATTATGTCTTTGCAAATACACATAATATGTCTAAATCATGCAATGAAGCAATAAATGAAGCAAATGAAATTGTAGGCGAGTATATAAACAACTATGATGTAATTCTGGATGTTTGTTATCCATCCATAGTTGAACAAGAACTGAGATTGAAAAGGATGGCTACTAAAATAAGCATAGGTGTAGATGTTTGTATTACTTATGAACGAGATTTTTATTTCAACCTCCCTGAGGTTCAGAAGGCTTTGCATGCAAATCGTACCAATCTTCCATACCAATGGTCTATGTGCAGCGGTTTCTTAAATTACAGTGACACTGATCCTAACATAAATATCCTTCCAGTTCTCAAAAGGATAGTTCAAAACCATATTCCAGTATGGGTTTTCAGTGGAGACCAAGATTCTGTTGTCCCATTACTAGGTTCTCGAACGCTGATTCGTGAACTAGCTCATGAACTAAAGTTCAAGATTACTGTTCCATATGGGGCTTGGTTCCACAAAGGCCAGGTTGGAGGTTGGGTAACAGAGTATGGAAATTTGTTGACTTTTGCCACTGTAAGAGGAGCTGCTCACATGGTACCCTATGCACAACCTTCAAGAGCACTCCATCTCTTTAGTTCATTTGTGAGTGGAAGGAGATTGCCAAACACAACACACCCTTCAATTGATTAA 1329 0.4153 MKSCWLLVGVLVLVGCACMLGTVGVEGYPDEDLIVRLPGQPNVGFKQYAGYVDIDVKHGRSLFYYFVEAENGHDKKPLSLWLNGGPGCSSIGGGAFTELGPFYPKGDGRGLRRNSMSWNRANDMLLFLLKWYEKFPSYRSRELFLTGESYAGHYIPQLANVLLDHNAHSTGFKFNIKGVAIGNPLLKLDRDAQATYEYFWSHGMVSDEVGLAITNDCDFDDYVFANTHNMSKSCNEAINEANEIVGEYINNYDVILDVCYPSIVEQELRLKRMATKISIGVDVCITYERDFYFNLPEVQKALHANRTNLPYQWSMCSGFLNYSDTDPNINILPVLKRIVQNHIPVWVFSGDQDSVVPLLGSRTLIRELAHELKFKITVPYGAWFHKGQVGGWVTEYGNLLTFATVRGAAHMVPYAQPSRALHLFSSFVSGRRLPNTTHPSID 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0395 442 Gene3D - 331 430 - -
Aed10g0395 442 ProSitePatterns Serine carboxypeptidases, serine active site. 145 152 IPR018202 GO:0004185
Aed10g0395 442 Gene3D alpha/beta hydrolase 124 260 IPR029058 -
Aed10g0395 442 Gene3D alpha/beta hydrolase 29 123 IPR029058 -
Aed10g0395 442 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 156 IPR001563 GO:0004185|GO:0006508
Aed10g0395 442 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Aed10g0395 442 PRINTS Carboxypeptidase C serine protease (S10) family signature 400 413 IPR001563 GO:0004185|GO:0006508
Aed10g0395 442 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 121 437 IPR001563 GO:0004185|GO:0006508
Aed10g0395 442 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 6 121 IPR001563 GO:0004185|GO:0006508
Aed10g0395 442 PANTHER CARBOXYPEPTIDASE 121 437 - -
Aed10g0395 442 PANTHER CARBOXYPEPTIDASE 6 121 - -
Aed10g0395 442 Gene3D - 284 320 - -
Aed10g0395 442 SUPERFAMILY alpha/beta-Hydrolases 36 433 IPR029058 -
Aed10g0395 442 Pfam Serine carboxypeptidase 121 430 IPR001563 GO:0004185|GO:0006508
Aed10g0395 442 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0395 Aed-Chr10 3210330 3214207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0395 291 433 Calmodulin-binding Proteins AT2G22960 26.573 1.54e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0395 K16297 - gmx:100815723 844.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0395 10 3210330 3214207 Aed10g0395 10 3210330 3214207 ECH