Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0385 ATGGTGCCTCCGGGGCCACCCACTCCCATTGGTGGTGCCCAGTCTGTTTCACCCTCTCTTTTAAGATCAAATTCAGGAATGCTAGGAGCTCAAGGGGGTCCCATGCCGCCACAGACGTCTTTCCCTTCACTCGTCTCACCACGCACTCAGTTCAACAACATGAACATTCTAGGAAATATGTCCAATGTGACTTCCATACTGAATCAGTCTTTCCCAAATGGAGTTCCAAATCCTGGGCTCTCTGGTCCAGGAAGTAGCCAGCGTGGAGCAATTGACACTGGAGCTGAAACAGATCCACTCTCCAGTGTTGGCAATGGAATGAGCTTCAATAATTCTTCATCCACATTTGTACAGTCAAGTATAGCGAATGCTGCTTCTGCTGGTCAAGGTCAGGGTCAACAATTTTCAAACCCTTCTAGTAACCAGCTGTTGCCAGATCAACAACATTCCCAACAGCTCGAACCTCAAAATTTCCAACACAGTCAGCAGTCAATGCAACAGTTCTCTGCTCCTCAAAATACACAGCAACCGCCACAGCCGCAGCATTTTCAATCAATTCGAGGAGGGATAGGTGGTATGGGACCAGTAAAGATGGAGCCCCAGGTAAGCAACGATCAACTTGGACAGCAGCAGCAACAGCAGTTGCAATCCTTGAGGAATCTCGCTTCAGTGAAGTTGGAACCACAACAAATGCAGACAATGAGAACTCTGGGACCTGTTAAAATGGAGCCTCAGCATTCTGATCAACCATTATTTTTGCAGCAGCAGCAACAACAACAGCAACAACCACAGTTTCTCCACATGTCAAGTCAATCGTCTCAGGCTGCTGCTGCCCAGATGAATCTTTTGCGCCATCACAGGCTTTTACAGTTACACCAACAACACCAGCAGCAACAACTATTGAAGGCAATGCCTCAACAACGCTCCCAACTACCACAGCAATTTCAACAGCAGAATATGCCTATGAGATCTCCTGTGAAGCCAGCATATGAACCAGGGATGTGTGCTCGGCGGCTGACACATTACATGTATCAGCAACAACATAGACCTGAAGATAACAATATCGAGTTCTGGAGGAAGTTTGTTGCTGAGTATTTTGCTCCTAATGCCAAGAAGAAATGGTGTGTTTCAATGTATGGAAGTGGAAGACAAACAACTGGAGTTTTCCCTCAGGATGTATGGCACTGCGAAATATGTAATCGCAAGCCTGGCCGTGGATTTGAAGCAACTGTTGAGGTTCTTCCTCGGCTTTTCAAGATAAAGTACGAAAGTGGTACTTTGGAAGAGCTACTTTATGTTGACATGCCTCGTGAATATCATAATTCCTCTGGTCAGATTGTTCTAGATTATGCAAAAGCAATACAAGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGTGATGGTCAACTTCGAATAGTTTTCTCTCCGGACTTGAAGATATGTTCTTGGGAATTTTGTGCTCGACGCCATGAAGAGCTCATACCCAGGAGATTGTTAATACCACAGGTTAGTCAGCTTGGAGCAGTTGCTCAAAAATACCAGGCTTTTACTCAAAATGCAACACCCAATGTATCTGTTCCCGAATTACAAAATAATTGCAATATGTTTGTTGCATCAGCACGTCAGTTGGCTAAAGCCTTAGAAGTACCATTGGTTAATGATTTAGGATATACAAAGAGATACGTGCGCTGCCTACAGATATCAGAAGTGGTAAATAGTATGAAAGACTTGATAGATTACAGCAGAGAAACTGGGACTGGGCCTATGGAGAGCTTAGCAAAATTCCCTCGGAGAACGAGTGGTTTATCTGGACCTCGAGGTCAAGCACAACAACATGAAGAACAATTACAGCAGCAGCAACAAAAACAAATGGTGGCCCATAACTCAAATGGTGATCAAAACTCAGTTCAAGCTGCTGCCATGCAAATTGCTTCTAGCAATGGTATGGTTAGTGTAAATAAAAATGTCAACCCAGCATCCTCATCAACCACCACAAGCACTATTGTTGGACTTCTTCACCAGAACTCTATGAATTCTAGACAACAAAATTCAATGAACAATGCAAGTAGTCCATATGGAGGTAGTTCTGTTCAGATTCCATCACCAGGTTCCTCCAGTACAGTGCCACAGGCCCAGCCAAACTCATCCCCTTTTCAATCACCAACACTATCCTCTTCTAACAACCCCCCTCAAACATCTCACCCTGCTTTAACTTCCGCCAATCACATGAGCACAACAAACTCACCAGCTAATATTTCCATGCAACAACAACAGCAACAACCATCTATTTCTGGTGAACCTGACCCTAGTGATGCTCAAAGCTCAGTCCATAAAATCATACACGAGATGATGATGTCCTCCCAGATTAACGGCTCAGGTGGAATGGTCAGTGTTGGTTCTCTTGGAAATGACGTGAAGAATGTAAATGGTATTTTGCCAGTGAGTGCCAATACAGGGCTCAATGGTGGCAATGGCTTGGTGGGTAACGGCGCAATGAACAGTAATTCTGGCATCGGAGTTGGTAATTATGGCACAATGGGTCTTGGTCAATCCGCTATGCCAAATGGAATCAGAGCTGCTATGGTAAATAATTCAATCATTAATGGAAGGGGAGGAATGGCATCTCTTGCCCGGGATCAAGTCATGAATCATCAACAGGATATGTCAAACCAACTACTTAGTGGGCTAGGGGCAGTAGGTGGCTTTAGTAATCTTCAATTTGATTGGAAACCTTCTCCTTGA 2742 0.4442 MVPPGPPTPIGGAQSVSPSLLRSNSGMLGAQGGPMPPQTSFPSLVSPRTQFNNMNILGNMSNVTSILNQSFPNGVPNPGLSGPGSSQRGAIDTGAETDPLSSVGNGMSFNNSSSTFVQSSIANAASAGQGQGQQFSNPSSNQLLPDQQHSQQLEPQNFQHSQQSMQQFSAPQNTQQPPQPQHFQSIRGGIGGMGPVKMEPQVSNDQLGQQQQQQLQSLRNLASVKLEPQQMQTMRTLGPVKMEPQHSDQPLFLQQQQQQQQQPQFLHMSSQSSQAAAAQMNLLRHHRLLQLHQQHQQQQLLKAMPQQRSQLPQQFQQQNMPMRSPVKPAYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAVAQKYQAFTQNATPNVSVPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMESLAKFPRRTSGLSGPRGQAQQHEEQLQQQQQKQMVAHNSNGDQNSVQAAAMQIASSNGMVSVNKNVNPASSSTTTSTIVGLLHQNSMNSRQQNSMNNASSPYGGSSVQIPSPGSSSTVPQAQPNSSPFQSPTLSSSNNPPQTSHPALTSANHMSTTNSPANISMQQQQQQPSISGEPDPSDAQSSVHKIIHEMMMSSQINGSGGMVSVGSLGNDVKNVNGILPVSANTGLNGGNGLVGNGAMNSNSGIGVGNYGTMGLGQSAMPNGIRAAMVNNSIINGRGGMASLARDQVMNHQQDMSNQLLSGLGAVGGFSNLQFDWKPSP 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0385 913 MobiDBLite consensus disorder prediction 124 183 - -
Aed10g0385 913 MobiDBLite consensus disorder prediction 603 634 - -
Aed10g0385 913 MobiDBLite consensus disorder prediction 679 771 - -
Aed10g0385 913 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 1 912 - -
Aed10g0385 913 Pfam LIM-domain binding protein 338 592 IPR029005 -
Aed10g0385 913 PANTHER LIM DOMAIN-BINDING PROTEIN 1 912 IPR029005 -
Aed10g0385 913 MobiDBLite consensus disorder prediction 582 634 - -
Aed10g0385 913 MobiDBLite consensus disorder prediction 679 775 - -
Aed10g0385 913 MobiDBLite consensus disorder prediction 124 213 - -
Aed10g0385 913 MobiDBLite consensus disorder prediction 68 107 - -
Aed10g0385 913 MobiDBLite consensus disorder prediction 1 44 - -
Aed10g0385 913 MobiDBLite consensus disorder prediction 12 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0385 Aed-Chr10 3131355 3139343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0385 1 909 C2H2 Transcription Factor Family AT1G43850 61.140 0.0 784
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0385 - - gmx:100787573 1541.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0385 10 3131355 3139343 Aed10g0385 10 3131355 3139343 ECH