Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0384 ATGGGAAAAGTGCAGTGGCTGAAGAGGAACCGGGTCTTTGCTAAGTCTAAAATTCTGTGTGAATTGTATAACAGGCTAATCATGTCATTAGTTAGATCTGCTGATCTAGCTCCTACATCATATGAAAATGCTAGACCAGGCTTGTCCTCCCAAATTTTTGGTCCTGATAAGCATAGGAGCATGTACATGACAGATAGTTACTCCAGCGAGAGTTATGAGAAGTACTTCAATGACTCACAAACAGAAGAACAGATAGAACCATCTAGCTCCAGCATCTCTGCAAGTTCAATTCACCTCAGAGCCAATTCAGGAGCTTCTATGGTTGCCAATAACCCATTTGACTCTTCTTTCATGTCTACAACAAGGCATCATGATGCTTATCAGTCAAACTCTGGATCAGATTTGATGGAGAATGGCGGAAGCCTGGATTCACGCGACGACAACGGTCTAATGAGATTAAAACTACAAGCATTGGAGAGGGCACTGCTTGATGACAGTGATGCTGACAATGAAGAAGAAGAGGAAGAGGAAGAAGAAGACATATTTGATGCTGCACAAAGCATGGAAATTGATCCTGACATTGCCGAGTGGGCCGATTCGATGCAGAACATGCTGCTCCATGATTCACCAAAGGAGTCCTCTTCTTCATATTCCAACATTAGCAGCAGCAGCATCAGCAGGACCACCAAGGAAACATCACAAACTTCTCAGACCCCAAAGAAACTGCTTTATGAATGTGCTATTGCACTTTCAGAAGGAAATGAAGAGGAGGGATCATCTATGATAAACAATCTCAGGCAGATGGTGTCAATTCAGGGAGAGCCTTCTCAGAGAATTGCAGCCTATATGGTTGAGGGACTCGCGGCTCGCCTCGCCGAATCCGGAAAAAGCATTTACAAAGCCTTGAGATGCAAGGAACCTCCCTCTTCAGACCGTCTTGCAGCTATGCAGATATTGTTTGAGGTCTGTCCATGCTTCAAGTTCGGGTTTGTTGCTGCTAACAATGCGATCACAGAAGCAGTGAAAGACGACATGAAGATCCACATCATAGATTTCGACATCAATCAAGGGAGTCAGTACATAACTCTAATCCAAGCACTTGCTTCAAGGTCAAGCAATCCACCACATGTTAGGTTGACCGGCGTTGACGATCCCGAATCCGTGCAGCGATCCATTGGAGGCCTAGAGATCATAGGACAAAGACTAGAGAAGCTAGCGGAGGCACTTGGTCTGCCTTTCGAGTTTCGAGCCGTGGCATCGAGGACTTCCATTGTCACCCCGTCAATGCTCAAATGTAGTAGTCTTAATGATGAAGAAGCACTTGTGGTGAACTTTGCATTCCAGCTTCACCACATGCCTGATGAGAGCGTCTCCACGGTGAACGAGCGGGACCAGCTTCTTCGGTTGGTGAAGAGCTTGAAGCCGAAGCTTGTGACGGTTGTGGAGCAAGATGTGAACACTAACACCACACCCTTCTTGACCAGATTCGTTGAGGCGTACAGTTACTACTCTGCTGTGTTTGAGTCGCTTGATGTTACTCTTCCCAGAGAGAGCCAGGACAGGATGAATGTTGAAAGGCAGTGCTTGGCAAGGGACATTGTGAACGTGGTTGCGTGTGAGGGAGAGGATAGGATTGAAAGGTACGAGGTTGCGGGGAAATGGAGGGCTAGGATGACTATGGCTGGCTTCACTTCGTCTCCGATGAGCACAAATGTGACTGATGAAATCCGACAACTCATTAAGGTGGTTTATTGCGACAGGTACAAGATTAAGGAGGAAATGGGTGCACTTCACTTTGGTTGGGAAGACAAAAACTTGATCGAGTTCAGGCGTTTTCAATTTGATGAACATCCTCAAGAAATGATGGGCCGGTCCACACTAATATGTAATGGAAGCATAGCTAGGATGGCCTTGGAGAACTGTTTACGAGCCACACCCCAATGCCTTTCTCCATTGAACTTTCAATCTTCAACAAGGGATAAGCTTGCCTTCCCAACTCACAGAGGTTTCAAGAAATCCTTGCAAAACTCAACACAATCATACCCTTCTCTTTACTCAACCGGTGCTGCCTACAGAAAATCCCGTTTTGTTTGCAATGCTCTTAAAGTGGTGACTGACTCAAGCTGGAATAACCTTGTGATTGCAAGTGAGACCCCTGTGTTGGTAGAGTTTTGGGCACCATGGTGTGGTCCATGCAGGATGATAGCTCCTGTTATCGATGAGTTAGCAAACGAATATGCAGGAAAAATTGCATGCTTCAAGCTTAACACAGATGATTCTCCAAACATAGCAACACAGTACGGTATCAGAAGCATACCAACAGTTCTGTTCTTCAAGAATGGAGAGAAAAAAGAAAGCATAATTGGTGCAGTTCCTAAGTCTACTCTGTCCGCAACAGTGGAAAAATATGTTGACTTATAA 2421 0.4535 MGKVQWLKRNRVFAKSKILCELYNRLIMSLVRSADLAPTSYENARPGLSSQIFGPDKHRSMYMTDSYSSESYEKYFNDSQTEEQIEPSSSSISASSIHLRANSGASMVANNPFDSSFMSTTRHHDAYQSNSGSDLMENGGSLDSRDDNGLMRLKLQALERALLDDSDADNEEEEEEEEEDIFDAAQSMEIDPDIAEWADSMQNMLLHDSPKESSSSYSNISSSSISRTTKETSQTSQTPKKLLYECAIALSEGNEEEGSSMINNLRQMVSIQGEPSQRIAAYMVEGLAARLAESGKSIYKALRCKEPPSSDRLAAMQILFEVCPCFKFGFVAANNAITEAVKDDMKIHIIDFDINQGSQYITLIQALASRSSNPPHVRLTGVDDPESVQRSIGGLEIIGQRLEKLAEALGLPFEFRAVASRTSIVTPSMLKCSSLNDEEALVVNFAFQLHHMPDESVSTVNERDQLLRLVKSLKPKLVTVVEQDVNTNTTPFLTRFVEAYSYYSAVFESLDVTLPRESQDRMNVERQCLARDIVNVVACEGEDRIERYEVAGKWRARMTMAGFTSSPMSTNVTDEIRQLIKVVYCDRYKIKEEMGALHFGWEDKNLIEFRRFQFDEHPQEMMGRSTLICNGSIARMALENCLRATPQCLSPLNFQSSTRDKLAFPTHRGFKKSLQNSTQSYPSLYSTGAAYRKSRFVCNALKVVTDSSWNNLVIASETPVLVEFWAPWCGPCRMIAPVIDELANEYAGKIACFKLNTDDSPNIATQYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSATVEKYVDL 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0384 806 SUPERFAMILY Thioredoxin-like 694 805 IPR036249 -
Aed10g0384 806 MobiDBLite consensus disorder prediction 124 138 - -
Aed10g0384 806 ProSiteProfiles GRAS family profile. 230 613 IPR005202 -
Aed10g0384 806 TIGRFAM thioredoxin: thioredoxin 705 803 IPR005746 GO:0015035
Aed10g0384 806 ProSitePatterns Thioredoxin family active site. 721 739 IPR017937 -
Aed10g0384 806 Gene3D Glutaredoxin 701 805 - -
Aed10g0384 806 PRINTS Thioredoxin family signature 768 779 - -
Aed10g0384 806 PRINTS Thioredoxin family signature 728 737 - -
Aed10g0384 806 PRINTS Thioredoxin family signature 720 728 - -
Aed10g0384 806 Pfam GRAS domain family 241 607 IPR005202 -
Aed10g0384 806 Pfam Thioredoxin 702 801 IPR013766 -
Aed10g0384 806 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 32 607 IPR030011 GO:0003700|GO:0005634
Aed10g0384 806 CDD TRX_family 713 801 - -
Aed10g0384 806 ProSiteProfiles Thioredoxin domain profile. 675 805 IPR013766 -
Aed10g0384 806 Coils Coil 168 188 - -
Aed10g0384 806 MobiDBLite consensus disorder prediction 207 237 - -
Aed10g0384 806 MobiDBLite consensus disorder prediction 162 186 - -
Aed10g0384 806 MobiDBLite consensus disorder prediction 124 147 - -
Aed10g0384 806 MobiDBLite consensus disorder prediction 165 186 - -
Aed10g0384 806 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 32 607 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0384 Aed-Chr10 3124426 3131782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0384 27 607 GRAS Transcription Factor Family AT1G21450 58.472 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aed10g0384 GRAS 1.2e-130 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0384 - - gmx:100798897 950.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0384 10 3124426 3131782 Aed10g0384 10 3124426 3131782 ECH