Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0378 ATGGATAGTCCTCCTAATTCTGCACCTTACGTAGTAGTTGCATGTGATGCGACTAGGGACCGCACTGAACATGAGATCAAACTCGTTGTTGATCATGTTCGGGCCAGGCGTGTCTTTCTATCTTCTGGTGACAAGTTGCTTGTACTATGTGTCTTGCATAAGGTGTCTCACCCTATGGGGTACCAGACATTAGCATGCCCCGAGTCTTTTGCTGGAACCAACTTTCGTGCAATGGAGGATCAAGTCAAAAAGAAAGTTGATGCATATGCAACTGAGCTTTTGTCAAGTTATGAAGATTTTGAAAGTGAAGGGGTTAGTATCGAAGTTAAAGTCACCGCGGGATTTCCAATTAAACAGGTTATTTTACAAGAGGTTACAAACTATAATGCATCTTGGATAATACTTGACAGACATCTTCGGCGCGAACTGAGGTACCACCTTAACAAGATGCCATGCAAGGTTGCATTGGTTAAAGATGACTTGTCTCTGGAGATATGGAGATCTCATGATGAACATGACACAAAGGTTACACAAACAAAATGTGTATATTCTTTGTCAAAGTCTGTGGCACTTTCAGATTGTCGTAGTGTTGAAGACATTGAGCATTCTATAATCTCTTGCAAAAGCTATCCACATTCTATATTTTCTTCTGATAGCTCTAGTATGACTAGGAGCTATACAAAGCAGTCATATGGTAACAGGCCACGGGAGAACAGTTCCTTATCAGATTTTGGATCTTCTTCTAAGCGAGAAAAATCAGGCATGAGCATCAAAGAAGAATATAGGCTCATTACTTCTCAGATTGACCAAAAGCAAAACCAAAGTGGCTTTCTGCCAAAACATTCAGATGCACCCCTTCTTTGTATTGGCTGTGGAACAAGAACCGAGTTGTCTATCAAGGAGTCAATGAAATTCAGCTACTCAGACATACAACTTGCAACAAATGATTTTTCTAAAGATAACTTGTTAGGTGAAGGTGGATATGGTCATGTATACAAAGGTGTTCTTAAAGATGGACAACAAATTGCCGCAAAGGTAAGGAAAGAAGAAAGTTCACAAGGGTTTTCTGAATTTCACTCTGAGGTGTATGTCTTAAGTTTTGCTCGACACAAGAACATAGTGATGCTGTTGGGTTACTGCTGCAAAGAAAAGAAAAACATCCTGATTTATGAATATATTTGCAACCAGTCTCTCCAGTGGCATTTATTTGGTTTATTCTTTATGAATCTGGAAAAAAAAACTTTTTTTTTTGTAGAAAATAATGAAGCTATTCTTGAGTGGCACCAAAGGTATGCCATTGCAATTGGAACTGCAAAGGGATTGCGTTTTCTACATGAGGAATGCCGTGGGGGTCCTATTATTCATAGGGACATGCGACCAAGCAATATACTTCTCACACATGATTTTGTTCCCATGCTAGGTGACTTTGGTCTTGCTAAATGGAAAACTGGTGATGATACTCTGCAAACAAGGATAATGGGCACATTAGGATACCTTGCCCCTGAGTATGCTGAAGATGGAATTGTTTCTGTGGGAACAGATGTGTACTCTTATGGCATTATTCTGTTACAGTTGATATCAGGGCGCCAGGTTGGAATTTCCAACATTAATCCAGAAAAACAACAATCTCTCCGACAATGGGCTGAGCCAATGATAGAGAAGTTGGCGTTACATGAACTGATTGATATTCGTCTGGGGGAATCATATGACATGTATGAACTCTACCTCATGGCTAAAGCAGCTTTCTTCTGTGTGGCAAGGAAACCTGAGATGCGTCCATCAATGGGAGAGGTACTTATATCGTAA 1806 0.4014 MDSPPNSAPYVVVACDATRDRTEHEIKLVVDHVRARRVFLSSGDKLLVLCVLHKVSHPMGYQTLACPESFAGTNFRAMEDQVKKKVDAYATELLSSYEDFESEGVSIEVKVTAGFPIKQVILQEVTNYNASWIILDRHLRRELRYHLNKMPCKVALVKDDLSLEIWRSHDEHDTKVTQTKCVYSLSKSVALSDCRSVEDIEHSIISCKSYPHSIFSSDSSSMTRSYTKQSYGNRPRENSSLSDFGSSSKREKSGMSIKEEYRLITSQIDQKQNQSGFLPKHSDAPLLCIGCGTRTELSIKESMKFSYSDIQLATNDFSKDNLLGEGGYGHVYKGVLKDGQQIAAKVRKEESSQGFSEFHSEVYVLSFARHKNIVMLLGYCCKEKKNILIYEYICNQSLQWHLFGLFFMNLEKKTFFFVENNEAILEWHQRYAIAIGTAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAKWKTGDDTLQTRIMGTLGYLAPEYAEDGIVSVGTDVYSYGIILLQLISGRQVGISNINPEKQQSLRQWAEPMIEKLALHELIDIRLGESYDMYELYLMAKAAFFCVARKPEMRPSMGEVLIS 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0378 601 PANTHER RECEPTOR-LIKE KINASE 9 599 - -
Aed10g0378 601 ProSitePatterns Tyrosine protein kinases specific active-site signature. 453 465 IPR008266 GO:0004672|GO:0006468
Aed10g0378 601 Pfam Protein kinase domain 318 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0378 601 CDD USP_Like 34 157 - -
Aed10g0378 601 ProSiteProfiles Protein kinase domain profile. 317 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0378 601 Gene3D Transferase(Phosphotransferase) domain 1 410 601 - -
Aed10g0378 601 ProSitePatterns Protein kinases ATP-binding region signature. 323 345 IPR017441 GO:0005524
Aed10g0378 601 Gene3D Phosphorylase Kinase; domain 1 291 392 - -
Aed10g0378 601 PANTHER OS01G0253100 PROTEIN 9 599 IPR045271 GO:0004714|GO:0006468
Aed10g0378 601 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 34 160 - -
Aed10g0378 601 MobiDBLite consensus disorder prediction 216 256 - -
Aed10g0378 601 MobiDBLite consensus disorder prediction 216 251 - -
Aed10g0378 601 SUPERFAMILY Protein kinase-like (PK-like) 301 599 IPR011009 -
Aed10g0378 601 Gene3D HUPs 11 159 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0378 Aed-Chr10 3052810 3056401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0378 305 599 Trihelix Transcription Factor Family AT5G38560 41.722 8.23e-71 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Aed10g0378 Pkinase 1.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0378 - - gmx:100800663 1013.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0378 10 3052810 3056401 Aed10g0378 10 3052810 3056401 ECH