Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0369 ATGGCTGTGCTGCAGCTGCTACTTGTTATTCTCTTTATTGGAGCAACTAAAACTCAACCCATCTCAAAGCCAAACTGTCCAACAAACTGTGGCTCCGTCACAATTCCCTTCCCATTCGGCATGACCGAGGATTGTTCCTTAGACGCTTCATTTCTCGTCAACTGCGACCGAACCTCTTCTTCATCACACACCCTCTTCTTGCCACACTCCAACATAAGCGTCCTAAACATCTCCCTCAACGGCCAAATGCAGATTTCATGGCCACCAGCCAGCGACTGCTACGCCGCCAGAGGCAAGCAAGTAAATCAAACATTTCAAGAAAACCTAAACCTCACAACTTTTCAAGTCTCCTCGAACCGAAACAAGTTCACCGTCATCGGGTGCGACACGCTCGGAGTGGTGGTGGGAATAGACTCGGAGGGGAGGAACTACACCACGGGGTGCGTGTCCCTTTGCAACAGGCTTGAGGACATCGAAACAAACGGGTCTTGTTCCGGAACCGGTTGTTGCGAGACTTCGATTCCACCCGGGTTGTCGGGTTTCTCCTACGGTTCCGGAAGCGTGTTCAACCACACGAGTGTGATTGACTTCAACCAGTGCGGGTATGCGTTCCTGGTGGAAGATGGGGCCTACAACTTCTCTTCCACGGACCTCGTCAACTTAGACAAAACTGCGTTTCCCGTTGGGGTGGATTGGGTTGTGAAGAACCACACGTGCCAAGAAGCTAAGAAGGAGGTTTCAAGTTACGCGTGTAAGGCAGAAAACAGTGAATGCTACCATTCATTCGAGGGATCTGGCTACCTTTGTAACTGCTCAAATGGCTTCCACGGAAACCCTTATCTACCTGCTGGTTGTCAAGATGTTAATGAATGCATGGGATCCAACGACTGCGTTGATGGGGCAAAGTGTAATAACTTTCCTGGTGGTTATTATTGTTCATGTTCGGACGGATTTGAAGGAGATGGAAAAAATGATGGAACAAGATGCACTCCCAAATCTAGCACCAATTCAAGGAAGGAGATCATATTGATAATTGCTTTGAGTGTGAGCGTAAGTCTTGTAGCACTACTTCTGGGAAGCTTCTATGTGTATTGGGTATCGAAGAAAAGAAAGAACATCAAACTGAAGGAACATTTTTTTCAACAAAATGGTGGTATTTTCTTACAACAACATATATCCAGGCATAAAGGATCAATTGAAACAGCCAAAGTCTTCACTATTGAGGAGTTAAAAGATGCCACCAACAACTTTGATGAAGGTAAAATTCTTGGTCAAGGTGGTCAAGGAACAGTCTACAAAGGAGTGTTGCTAGATAACAGAACCGTGGCAATCAAAAAGTCCAAAATCAGTGATCCAAATCAAATTGAGCAATTCATCAATGAGGTGATTGTGCTTTCCCAAATCAACCATAGGAATGTGGTAAAGATTTTGGGTTGTTGTTTGGAGACGGAAGTTCCTATGCTTGTTTATGAATTCATTCCCAATGGTACTATTTATGAGCACCTTCATGATTATAATTGTTCTCTAAAACTTACATGGAAAACAAGATTGAGAATAGCAACAGAAACCGCTGGGGCCTTGGCTTACTTGCATTCTGCTACCTCTACACCAATCATACACAGAGATGTGAAAACTACGAATATTCTACTTGATCACAATCTCATTGCAAAAGTTTCTGATTTTGGAGCTTCAAGGATTTTTCCCCTTGATCAAACTCAATTAACCACTCTAGTGCAGGGAACATTAGGGTATCTCGACCCGGAATACTTTCATACAAGCCTATTGACCGAGAAGAGTGATGTGTATAGTTTTGGAGTGGTTCTAGCAGAACTACTAACAGGAAAAAAAGCACTTTCATTTGATAGGCCAGAGGCTAATAGAAACCTTGCACTGTACTTTGTTTCTTCAATGAAAACAGGTCAATTACTTGACATTGTGGATAACCACATATTGCATGAGGCAATTAATGTTGATCAACTAACTGAAGTTGCCAATATTGCAAAGCGGTGCTTAAAGGTGAAAGGAGAGGATAGACCTACGATGAAAGAAGTGGCAATGGAACTTGAGGGACTTCAAATTGTGAGAAAGCATCGATGGGAGGAAAGTGTTAATTCATCATCTTCAGAAGAGACCGAAAACTTACTAAAAATAACATCATCCGTTCCCATGAGTGTTGAAGATGGCAGTAATGGAAGTGGCATTAATTCTGGTTTTGATAGCTTAAATCTATTTTCAGTGTCTTTGGGTGGTGGAAGATGA 2259 0.4303 MAVLQLLLVILFIGATKTQPISKPNCPTNCGSVTIPFPFGMTEDCSLDASFLVNCDRTSSSSHTLFLPHSNISVLNISLNGQMQISWPPASDCYAARGKQVNQTFQENLNLTTFQVSSNRNKFTVIGCDTLGVVVGIDSEGRNYTTGCVSLCNRLEDIETNGSCSGTGCCETSIPPGLSGFSYGSGSVFNHTSVIDFNQCGYAFLVEDGAYNFSSTDLVNLDKTAFPVGVDWVVKNHTCQEAKKEVSSYACKAENSECYHSFEGSGYLCNCSNGFHGNPYLPAGCQDVNECMGSNDCVDGAKCNNFPGGYYCSCSDGFEGDGKNDGTRCTPKSSTNSRKEIILIIALSVSVSLVALLLGSFYVYWVSKKRKNIKLKEHFFQQNGGIFLQQHISRHKGSIETAKVFTIEELKDATNNFDEGKILGQGGQGTVYKGVLLDNRTVAIKKSKISDPNQIEQFINEVIVLSQINHRNVVKILGCCLETEVPMLVYEFIPNGTIYEHLHDYNCSLKLTWKTRLRIATETAGALAYLHSATSTPIIHRDVKTTNILLDHNLIAKVSDFGASRIFPLDQTQLTTLVQGTLGYLDPEYFHTSLLTEKSDVYSFGVVLAELLTGKKALSFDRPEANRNLALYFVSSMKTGQLLDIVDNHILHEAINVDQLTEVANIAKRCLKVKGEDRPTMKEVAMELEGLQIVRKHRWEESVNSSSSEETENLLKITSSVPMSVEDGSNGSGINSGFDSLNLFSVSLGGGR 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0369 752 Pfam Calcium-binding EGF domain 287 329 IPR001881 GO:0005509
Aed10g0369 752 CDD STKc_IRAK 423 691 - -
Aed10g0369 752 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 16-RELATED 15 724 - -
Aed10g0369 752 SMART egf_5 290 330 IPR000742 -
Aed10g0369 752 SMART egf_5 238 286 IPR000742 -
Aed10g0369 752 ProSiteProfiles Protein kinase domain profile. 417 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0369 752 Gene3D Plasmodium vivax P25 domain 188 337 - -
Aed10g0369 752 SMART serkin_6 417 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0369 752 ProSitePatterns Calcium-binding EGF-like domain signature. 287 312 IPR018097 GO:0005509
Aed10g0369 752 SUPERFAMILY EGF/Laminin 286 323 - -
Aed10g0369 752 ProSiteProfiles EGF-like domain profile. 287 330 IPR000742 -
Aed10g0369 752 Gene3D Phosphorylase Kinase; domain 1 388 492 - -
Aed10g0369 752 Gene3D Transferase(Phosphotransferase) domain 1 493 713 - -
Aed10g0369 752 Pfam Protein tyrosine and serine/threonine kinase 420 688 IPR001245 GO:0004672|GO:0006468
Aed10g0369 752 CDD EGF_CA 287 321 - -
Aed10g0369 752 Pfam Wall-associated receptor kinase galacturonan-binding 26 82 IPR025287 GO:0030247
Aed10g0369 752 ProSitePatterns Serine/Threonine protein kinases active-site signature. 538 550 IPR008271 GO:0004672|GO:0006468
Aed10g0369 752 SMART egfca_6 287 330 IPR001881 GO:0005509
Aed10g0369 752 SUPERFAMILY Protein kinase-like (PK-like) 399 689 IPR011009 -
Aed10g0369 752 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 15 724 IPR045274 GO:0007166
Aed10g0369 752 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 303 314 IPR000152 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0369 Aed-Chr10 2985929 2989491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0369 6 715 Receptor kinase-like Gene Family AT1G21250 46.301 0.0 617
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Aed10g0369 PK_Tyr_Ser-Thr 8.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0369 - - gmx:100798027 1275.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0369 10 2985929 2989491 Aed10g0369 10 2985929 2989491 ECH