Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0360 ATGCCTCCGCGGCGGTGCACGGTGTCTGCGGCGGTGCAGATGGGCAGCGACGCGAGCGACTCGGCGGAGGACTTTGTCATGCGGTGCCTCTCCTGCGAGGAGGAGTACGACGTGGACGACTCCGGAACCTGCAGGGAGTGCTACCAAGAAGCCAACGAGGCCGAGGAGGAGCTCCGCCGCGAGATCGAAGAGCTCAAATCAAAAGTCTCCTTCCTCACTCTCCCCTCTCCCAATCTCAGTGCTTCCACCACCGATATCGTCCTCGTTCCGATCGACGTCTCCGACACCGTCCCCATTCCCGCTCACAAGCACCTCCTGGTGAGTCGCTCTCCTGTTTTCAAAGCAATGCTTGAGAATGATATGGCAGAAAGGCGGAGTGGCACCATCAGGATTTCTGATGTATCATATGATACCCTTCATGCTTTTGTTAATTATTTATACACTGCTGAAGCGCCCCTTGATAACGAATTGGCGTGCAACCTGTTGGTTTTAGGAGAAAAGTATCAGGTGAAGCATCTCAAGACATATTGTGAAAAGTATTTGATCGCCAAAATGAATTGGAGTAAAGCCATTTCTAACTATGCCTTTGCATATCAATACAATTGCAAACAATTACGAAGTGCGTCCTTGGCAGTGATCTTGGACAACATGGACTTGCTCACTCAAAATGAATATTATGCGGAGCTGGTGGACACTAATCCTCGTCTTGTTGTGGAAATATATGAAACATATATTGGCAAGCAATTAAATACTGCAGGCGCATTTTAG 768 0.4922 MPPRRCTVSAAVQMGSDASDSAEDFVMRCLSCEEEYDVDDSGTCRECYQEANEAEEELRREIEELKSKVSFLTLPSPNLSASTTDIVLVPIDVSDTVPIPAHKHLLVSRSPVFKAMLENDMAERRSGTIRISDVSYDTLHAFVNYLYTAEAPLDNELACNLLVLGEKYQVKHLKTYCEKYLIAKMNWSKAISNYAFAYQYNCKQLRSASLAVILDNMDLLTQNEYYAELVDTNPRLVVEIYETYIGKQLNTAGAF 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0360 255 SMART BTB_4 84 185 IPR000210 GO:0005515
Aed10g0360 255 CDD BACK 190 229 - -
Aed10g0360 255 CDD BTB_POZ_ZBTB_KLHL-like 84 168 - -
Aed10g0360 255 ProSiteProfiles BTB domain profile. 84 155 IPR000210 GO:0005515
Aed10g0360 255 Gene3D - 187 254 - -
Aed10g0360 255 Gene3D Potassium Channel Kv1.1; Chain A 49 186 IPR011333 -
Aed10g0360 255 PANTHER GH01369P 21 252 - -
Aed10g0360 255 PANTHER SPECKLE-TYPE POZ PROTEIN 21 252 - -
Aed10g0360 255 SUPERFAMILY POZ domain 83 182 IPR011333 -
Aed10g0360 255 Coils Coil 44 68 - -
Aed10g0360 255 Pfam BTB/POZ domain 83 183 IPR000210 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Aed10g0360 BTB 1.7e-20 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0360 K10523 - gmx:100794118 439.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0360 10 2920358 2923055 Aed10g0360 10 2920358 2923055 ECH