Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0357 ATGCTGCAAACAGGTCCCGTCGCCGCCTCCGGTGGCCGCACGGTGGTTGTGGGGATCAAGATGGACTCCCCCAGCAAGGAATTGCTCACGTGGGCTTTGGTCAAAGTTGCACACCCCGGTGATATCGTCGTTGCTCTGCATGTTCTTGGGAACGATGAAACTGTGAATGTAGACGGCAAATCGTCTCTGCTTTCGCTTGTCAAGGCGTTTGACTCTGTTCTTGCTGTTTATGAGGGATTCTGCAATTTGAAACAGCTGGATCTCAAGCTCAAAATTTGCCGTGGTTCATCAGTGAAGAATATTTTGGTTCGAGAAGCGAATAGTTACTCTGCAACTCATGTTGTTGTTGGAACTACTCATGGCCTGCATAAAATCCGGTCATCCACCGTTTTAGCTAAGTACTGTGCTAAAAAGTTATCCAAGGATTGCTGTGTTCTTGCTGTCAACAATGGGAAAGTTGTGTTCAAGCGTGACAGCTCGCCACCAAGTGTTACTGAGTTACAAGGAATTGATCGCCGTAACAGACATGGTTTGATTGGTTCAATTCATTGGACACTCGGTAAGAGTACAAAAATTCTAAGTGAAGACAATTCAGTGATGGATGCTGATGAGAAGAAAACTGAGCAGATTTCGGATCACAGTTTAGCTAAGTTTTTTCTGGAATCTACAGAAACTGTTAGGAACCCGAGCTGTTCAATTTGCGGTACAACCCTGGCATTGCCTGACCCTTCTTGCTACCAATCTGCAGAAGGGGTTTCTGGTGATGATGGTAGAGAGAATTCTTTGGCTATAGTGCCTGTGCAATCCACTGTTGAAGCAAAAACGGAATTGAAACCAGGTTGGCCACTACTACACCGCGGAATTTTATCAGATAAACAATCTGCTGAAAGATCTTTGATGCACCCCCAGATCTCTGTGGTCCAGTGGGCAATGAGGTTGCCTTCTAGAAACCTTTCATATGCTGTAGATCATGATGAAAAGCCTACAATTTGTGATCGAGGTCAGGATCAACCTGCAGCTTTAGATAGTGAAAGTGGTGCTCTTGTTCCAGTAGATGCTGAAATAGGGTCCACTTCTTCGCCCGAACGCAATTCAGGAAACATTCCTAAGGAATTGGAGGGGCTTCATGAGAAATACTCGTCTACTTGCAGATTGTTTGAGTATCAAGAACTTGTATCGGCCACATCGAATTTCTTGCCTGAGAACTTGATTGGGAAAGGAGGAAGCAGTCAGGTTTATAGAGGCTGCCTTCCTGATGGCAAGGAACTCGCCGTCAAGATCCTAAAGCCTTCTGATGATGTATTGTCGGAATTTATTCTGGAAATAGAAATTATCACTACCTTGCATCACAAAAACATTATTTCCCTTCTGGGGTTCTGCTTTGAGAATGGCAAACTTCTTCTGGTTTATGATTTCTTATCAAGAGGAAGCCTTGAAGAGAATCTTCATGGTAACACGAAAAATTCACTTGTGTTTGGTTGGTCCCAGAGATATAAGGTAGCGGTGGGTGTTGCCGAGGCTTTAGATTATCTTCATTCTAAAGATGATCAACCCGTGATCCACCGGGATGTAAAGTCATCAAATGTATTATTATCTGAGGATTTTGAACCCCAGCTCTCTGATTTTGGACTAGCAAAATGGGCATCAACCTTGTCATCACACATAACCTGCACAGATGTTGCTGGAACCTTTGGGTTTGCAAGTCCAATTCTAAATAGTGGAAAGGTGTTACAATTGTTAGATCCTAGTTTGGGTGATAATTATGATCATGAGGAGATGGAAAAGATGGTATTGGCAGCCACTCTCTGCATAAAACGTGCTCCAAGGGCTAGGCCTCAAATGAGCCTTGTGTCAAAGCTCCTTCAAGGTGACTCTGAGGCAATCAAGTGGGCAAGGTTACAAGTTAATGCTTTGGACGCACCAGAAATGCTTGATGATGAAGCGTGTTCACCGAGTAATCTACAGTCACACATAAATCTTGCACTGCTTGATGTGGAGGATGACTCACTCTCCATGTGCAGTGTTGAGCAGGGTCTCACTTTGGAGGACTACTTGAGAGGCCGGTGGAGCCGTGCATCAAGCTTTGACTGA 2091 0.4448 MLQTGPVAASGGRTVVVGIKMDSPSKELLTWALVKVAHPGDIVVALHVLGNDETVNVDGKSSLLSLVKAFDSVLAVYEGFCNLKQLDLKLKICRGSSVKNILVREANSYSATHVVVGTTHGLHKIRSSTVLAKYCAKKLSKDCCVLAVNNGKVVFKRDSSPPSVTELQGIDRRNRHGLIGSIHWTLGKSTKILSEDNSVMDADEKKTEQISDHSLAKFFLESTETVRNPSCSICGTTLALPDPSCYQSAEGVSGDDGRENSLAIVPVQSTVEAKTELKPGWPLLHRGILSDKQSAERSLMHPQISVVQWAMRLPSRNLSYAVDHDEKPTICDRGQDQPAALDSESGALVPVDAEIGSTSSPERNSGNIPKELEGLHEKYSSTCRLFEYQELVSATSNFLPENLIGKGGSSQVYRGCLPDGKELAVKILKPSDDVLSEFILEIEIITTLHHKNIISLLGFCFENGKLLLVYDFLSRGSLEENLHGNTKNSLVFGWSQRYKVAVGVAEALDYLHSKDDQPVIHRDVKSSNVLLSEDFEPQLSDFGLAKWASTLSSHITCTDVAGTFGFASPILNSGKVLQLLDPSLGDNYDHEEMEKMVLAATLCIKRAPRARPQMSLVSKLLQGDSEAIKWARLQVNALDAPEMLDDEACSPSNLQSHINLALLDVEDDSLSMCSVEQGLTLEDYLRGRWSRASSFD 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0357 696 Pfam Protein kinase domain 402 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0357 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 519 531 IPR008271 GO:0004672|GO:0006468
Aed10g0357 696 Gene3D Transferase(Phosphotransferase) domain 1 571 639 - -
Aed10g0357 696 PANTHER - 566 679 - -
Aed10g0357 696 ProSitePatterns Protein kinases ATP-binding region signature. 404 426 IPR017441 GO:0005524
Aed10g0357 696 Pfam Universal stress protein family 13 145 IPR006016 -
Aed10g0357 696 Gene3D Phosphorylase Kinase; domain 1 365 472 - -
Aed10g0357 696 PANTHER OS08G0249100 PROTEIN 566 679 - -
Aed10g0357 696 Gene3D HUPs 12 150 IPR014729 -
Aed10g0357 696 ProSiteProfiles Protein kinase domain profile. 398 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0357 696 SMART serkin_6 398 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0357 696 SUPERFAMILY Protein kinase-like (PK-like) 379 622 IPR011009 -
Aed10g0357 696 Gene3D Transferase(Phosphotransferase) domain 1 473 570 - -
Aed10g0357 696 PANTHER OS08G0249100 PROTEIN 6 569 - -
Aed10g0357 696 PANTHER - 6 569 - -
Aed10g0357 696 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 13 119 - -
Aed10g0357 696 CDD USP_Like 14 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0357 Aed-Chr10 2888139 2892369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0357 384 634 Receptor kinase-like Gene Family AT1G60800 35.762 2.29e-49 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Aed10g0357 Pkinase 2.1e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0357 - - aprc:113846853 983.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0357 10 2888139 2892369 Aed10g0357 10 2888139 2892369 ECH