Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0340 ATGTCGACCCAGAATCGTCGTTCGTCGTTTACTTCCTCAACGACGTCGTCTTTGGCGAAACGCCATGCAGCCTCCTCCGCAACGACGACGTCGTCTTTGGCCAAGAAGCGCCCACCTCTCTCCAACCTCACCAACACCGTTGCTCACCGCAACTCTTCCTCTTCGGTTCCATGCGCAGGTAAAGTTGCGAAGGCCAAGAAAGAGGTTGTTCCGGCGTGCTCAGGGAACAAAAGACCCACATTGGCGAATGTGAAACCCGCTAGTGCAGTTGTTTTTCCTAAGGCTAATTCTTACCTTGTAAAGAATGAAGCTCCTCCTCCTCCGCCTCCTTCAGCTGCCGTTGTTACTGTTCCTGCTCCGAGCACGGTGATGGATGTTTCACCTACTAAGTCGGATGCAATGTCGGTTTCTATGGATGAGTCAATGTCCTCTTGCGACTCTTTCAAGAGCCCTGACATTGAATACGTGGACAATAGCGATGTTGCAGCAGTTGATTCAATTCAGAGGAAGACATTCAGCAATCTCAACATCTCTGATTCTACAGAACCAGCAGGGAACATTTGTAGTAGAGACATACTTGTTGAGTTGGAAAAAGGGGACAAATTTGTCAGTGTTGATAATAATCACGCGGATCCTCAGCTCTGTGCAACATTTGCTTGTGATATCTACAAGCATCTTCGTGCTTCTGAGGCAAAGAAAAGGCCTTCCACAGACTTCATGGAGAGAATTCAGAAGGACATAAATCCCAGCATGCGTGCCATTTTGATTGATTGGCTTGTGGAGGTGGCTGAAGAGTATAGGCTAGTACCTGATACGTTGTATTTGACAATAAACTACATTGATCGGTATCTTTCAGGGAATCTAATGAACAGACAAAGGTTACAATTACTTGGTGTTGCCTCCATGATGATTGCCTCTAAGTACGAGGAGATTTGTGCGCCTCAGGTTGAGGAATTTTGTTACATAACTGATAACACATACTTCAAAGAAGAGGTTTGGGTTGAATTCTCTTGCGGCTTCAAGTTATATTTGTTTATGTATGTTGAGGTGTACACATCTCAAGCAAAATCATTCTCTGCAGGTTTTGCAGATGGAATCTGCTGTCTTGAATTTTCTCAAGTTCGAAATGACAGCCCCGACAACGATTTGTACGTGCAGCTCAAGGAGTTGATGAGTATTGTCCCCCATTTTAACGTGGTTCCTCAGGTCCCTTCGCTGCATCTAGAGTGCTTGACAAACTATATTGCCGAATTGTCGCTGTTGGAGTACACTATGCTTTGTTATGCTCCATCACTTATAGCCGCTTCTGCAATTTTCCTTGCCAAATTTATACTTTTTCCTTCAAAGAAACCATGGAATTCTACATTGCAGCATTACACCCTGTACCAGCCTTCTGATCTGTGTGTTTGTGTAAAGGAGCTCCACCGTCTTTGTTGCAACAGCCCTAACTCTAATTTGCCTGCAATTAGGGAGAAATACAGTCAGCACAAGTACAAATATGTGGCCAAGAAGTACTGCCCTCCTTCAATTACCCCAGATTTTTTTCAGAATTGA 1554 0.4466 MSTQNRRSSFTSSTTSSLAKRHAASSATTTSSLAKKRPPLSNLTNTVAHRNSSSSVPCAGKVAKAKKEVVPACSGNKRPTLANVKPASAVVFPKANSYLVKNEAPPPPPPSAAVVTVPAPSTVMDVSPTKSDAMSVSMDESMSSCDSFKSPDIEYVDNSDVAAVDSIQRKTFSNLNISDSTEPAGNICSRDILVELEKGDKFVSVDNNHADPQLCATFACDIYKHLRASEAKKRPSTDFMERIQKDINPSMRAILIDWLVEVAEEYRLVPDTLYLTINYIDRYLSGNLMNRQRLQLLGVASMMIASKYEEICAPQVEEFCYITDNTYFKEEVWVEFSCGFKLYLFMYVEVYTSQAKSFSAGFADGICCLEFSQVRNDSPDNDLYVQLKELMSIVPHFNVVPQVPSLHLECLTNYIAELSLLEYTMLCYAPSLIAASAIFLAKFILFPSKKPWNSTLQHYTLYQPSDLCVCVKELHRLCCNSPNSNLPAIREKYSQHKYKYVAKKYCPPSITPDFFQN 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0340 517 Gene3D - 221 234 - -
Aed10g0340 517 PANTHER CYCLINS 403 516 IPR039361 -
Aed10g0340 517 ProSitePatterns Cyclins signature. 252 283 IPR006671 -
Aed10g0340 517 SMART cyclin_7 257 354 IPR013763 -
Aed10g0340 517 SMART cyclin_7 388 476 IPR013763 -
Aed10g0340 517 CDD CYCLIN 405 475 IPR013763 -
Aed10g0340 517 PANTHER CYCLINS 26 332 IPR039361 -
Aed10g0340 517 Gene3D - 377 514 - -
Aed10g0340 517 SUPERFAMILY Cyclin-like 211 332 IPR036915 -
Aed10g0340 517 PANTHER CYCLIN-A1-1 403 516 - -
Aed10g0340 517 MobiDBLite consensus disorder prediction 1 60 - -
Aed10g0340 517 CDD CYCLIN 251 330 IPR013763 -
Aed10g0340 517 Pfam Cyclin, N-terminal domain 221 332 IPR006671 -
Aed10g0340 517 Pfam Cyclin, C-terminal domain 406 503 IPR004367 -
Aed10g0340 517 SMART Cyclin_C_2 388 507 IPR004367 -
Aed10g0340 517 PIRSF Cyclin_A_B_D_E 399 514 IPR039361 -
Aed10g0340 517 PIRSF Cyclin_A_B_D_E 1 335 IPR039361 -
Aed10g0340 517 PANTHER CYCLIN-A1-1 26 332 - -
Aed10g0340 517 MobiDBLite consensus disorder prediction 1 58 - -
Aed10g0340 517 Gene3D - 235 332 - -
Aed10g0340 517 SUPERFAMILY Cyclin-like 405 509 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0340 Aed-Chr10 2762729 2766339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0340 4 517 Core Cell Cycle Gene Families AT1G44110 53.065 3.93e-170 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0340 K06627 - gmx:547781 749.584