Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0337 ATGGCTAGCCTTTCACAGCAGCAACCAAGGGGTGTTAATGGAGGTAGCAGCCGCATAGCAGCCGTCAATGTTACCCCTTCTAACAACCTTCCTGCAGATCATGCTCATGCCTCCTCAAATCATGATGAGAAACCTGGGTGGAAGAAGTTCCTTGCATATGTGGGTCCTGGCTTTCTAGTCTCCTTGGCTTACCTTGATCCTGGAAACATGGAAACTGATCTGCAAGCTGGAGCTGACCACCAATATGAGCTGTTGTGGGTAATTCTTATTGGACTCGTGTTTGCGCTTATAATTCAATCATTGGCTGCGAATCTAGGCGTAACCACTGGCAAACACCTTTCAGAATTATGTAAAGCCGAATACCCATTATTGGTCAAGTACTGCTTATGGTTATTAGCCGAGCTCGCTGTCATAGCTGCAGACATACCTGAAGTGATTGGCACAGCCTTTGCTTTGAACATACTCTTCCACATCCCAGTATGGGCAGGGGTTCTAGTGACTGGCTGCAGCACCCTCTTATTTCTTGGTCTGCAGAGATTTGGGGTAAGGAAGTTAGAACTGTTGATATCAGTCCTAGTTTTTGTAATGGCTGGTTGTTTCTTTGGGGAAATGAGCTATGTGAAACCTCCTGCTTCTGGTGTATTAAAAGGAATGTTTGTGCCAAAACTCAGTGGTCAAGGTGCCACAGGAGATGCTATTGCCCTTTTGGGTGCCCTTGTCATGCCGCACAATCTTTTCCTCCACTCTGCTCTGGTGCTGTCTAGAAAAGTACCCAGTTCCGTGCGTGGCATCAATGATGCATGTAGATACTTTCTCATGGAAAGTGGATTCGCACTGTTTGTGGCATTTCTAATCAATGTTGCAATGGTTTCTGTGGCCGGAACTGTTTGCTCAGCAGACAATCTTTCTGCAGAAAATGCTAATCAGTGCAGCGATCTTACCCTTAACTCTGCTTCCTTCCTTCTCAAGAATGTTTTGGGAAAGTCGAGCTCAACCATTTATGCCATAGCACTGCTAGCCTCAGGACAAAGTTCAGCTATCACTGGAACCTATGCAGGGCAATTCATCATGCAGGGTTTCTTGGACATGAGGATGAAAAGTTGGGTTAGAAACTTTGTGACTAGGTGCGTTGCCATAACTCCTAGTCTTATTGTTTCCATCATCGGTGGTTCTGCTGGGGCCGGTCGCCTTATCATCATTGCATCGATAATTGTGATATCATGGATACTAGGTTTCGGGATCATTGGTATAAACGTGTACTACCTCTCTACTGCCTTCGTGGGTTGGCTAATTCATAGTAGTCTACCAAAGGTGGCAAATGTGTTCATTGGGATCATAGTGTTTCCTCTAATGGCACTTTATGTTGGTGCAGTAATCTACCTAACCTTGAGAAAAGACACTGTTAGGACATATGTTGAGACAAAGAATGAACCAGCAATGCAAACTCACATGGAAAAGGGGTTTATGGCTAATGGTCAATTAGAGTTGAGTCAAGTTCCCTACAGAGAAGATTTGGCTGATATCCCACTACCACAATAG 1539 0.449 MASLSQQQPRGVNGGSSRIAAVNVTPSNNLPADHAHASSNHDEKPGWKKFLAYVGPGFLVSLAYLDPGNMETDLQAGADHQYELLWVILIGLVFALIIQSLAANLGVTTGKHLSELCKAEYPLLVKYCLWLLAELAVIAADIPEVIGTAFALNILFHIPVWAGVLVTGCSTLLFLGLQRFGVRKLELLISVLVFVMAGCFFGEMSYVKPPASGVLKGMFVPKLSGQGATGDAIALLGALVMPHNLFLHSALVLSRKVPSSVRGINDACRYFLMESGFALFVAFLINVAMVSVAGTVCSADNLSAENANQCSDLTLNSASFLLKNVLGKSSSTIYAIALLASGQSSAITGTYAGQFIMQGFLDMRMKSWVRNFVTRCVAITPSLIVSIIGGSAGAGRLIIIASIIVISWILGFGIIGINVYYLSTAFVGWLIHSSLPKVANVFIGIIVFPLMALYVGAVIYLTLRKDTVRTYVETKNEPAMQTHMEKGFMANGQLELSQVPYREDLADIPLPQ 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0337 512 Hamap Divalent metal cation transporter MntH [mntH]. 32 426 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aed10g0337 512 PRINTS Natural resistance-associated macrophage protein signature 232 255 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aed10g0337 512 PRINTS Natural resistance-associated macrophage protein signature 129 155 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aed10g0337 512 PRINTS Natural resistance-associated macrophage protein signature 370 387 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aed10g0337 512 PRINTS Natural resistance-associated macrophage protein signature 182 203 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aed10g0337 512 PRINTS Natural resistance-associated macrophage protein signature 157 176 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aed10g0337 512 PRINTS Natural resistance-associated macrophage protein signature 342 361 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aed10g0337 512 PANTHER METAL TRANSPORTER NRAMP5 403 512 - -
Aed10g0337 512 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 40 405 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aed10g0337 512 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 403 512 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aed10g0337 512 PANTHER METAL TRANSPORTER NRAMP5 40 405 - -
Aed10g0337 512 Pfam Natural resistance-associated macrophage protein 71 417 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aed10g0337 512 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 48 417 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0337 Aed-Chr10 2733397 2737160 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0337 43 512 Inorganic Solute Cotransporters AT1G15960 57.371 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0337 K21398 - gmx:100787785 898.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0337 10 2733397 2737160 Aed10g0337 10 2733397 2737160 ECH