Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0327 ATGGGCGATAGGGTGGAAACGCTTGCGAGAATAGCCCAGTGGAAAATCGACAACTTCGGACCTTGTTCCTACAAAAAATCTGAACCCTTCAAGGTCGGAATCTGGAACTGGTACTTTTCAATTGTTTTGAAGGATAATCCACCCTTTGCTCGATTCATTCTTCGAGTCTCCAATGCTGGCTCATCCCGCAGCTTTCATGTTTCCCCAGTTCAAGAAAAGCTGCTTAGAACACATGATGATTTTGTCTGGCCTGTGGATACTACTTTTGTTGGTCGCTTCATCATTGATGTTGAGTTTCTAGACCTGAAGATATCCCCTCCCAGTGGTGGAGAAACTAGTTCTGTATGGCCATCTGATGGAAATTCTCAATCCATTGCATTCCAAAGTAGCACTCTTCATAGCCTCTCTCGCATGCTTGATGAGGCTATACATGCTGACCTAACCATCATCACTGCTGATGGAACAACATTGAGAGCTCATAAGGCAGTTCTCTCAGCAAGTTCTCCAGTGTTCCAGAGCATGTTTCATCACAACCTGAAGGAAAAAGAGTCCTCCACAATTCACATTCAAGACATGTCACTTGAGTCCTGCAGTGCTCTTCTAAGTTATTTGTATGGCACAATCAAGCAAGAAGGTTTCTGGAAACACCGGCTCGCGTTGCTCGGAGCTGCAAATAAATATGACATTGGAAGCCTCAAAGACTTATGTGAGGAAAGCCTTATGGAAGATCTCAACTCAGGAAATGTTCTTGAGATGCTGAATGAGGCTTGGCTTTATCAATTGCACAAGCTTAAGAAAGGGTGCTTGGTTTTCTTATTTCAATTTGGTAAGATATATGATATCAAAGATGAAATGAATAAATTTTTCCAGCATGCAGATAGGGAGCTAATGCTGGAGATGTTTAACGAGGTGCTTTCAATTTCGAACCCTGTATAA 936 0.4252 MGDRVETLARIAQWKIDNFGPCSYKKSEPFKVGIWNWYFSIVLKDNPPFARFILRVSNAGSSRSFHVSPVQEKLLRTHDDFVWPVDTTFVGRFIIDVEFLDLKISPPSGGETSSVWPSDGNSQSIAFQSSTLHSLSRMLDEAIHADLTIITADGTTLRAHKAVLSASSPVFQSMFHHNLKEKESSTIHIQDMSLESCSALLSYLYGTIKQEGFWKHRLALLGAANKYDIGSLKDLCEESLMEDLNSGNVLEMLNEAWLYQLHKLKKGCLVFLFQFGKIYDIKDEMNKFFQHADRELMLEMFNEVLSISNPV 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0327 311 SMART BTB_4 145 244 IPR000210 GO:0005515
Aed10g0327 311 Gene3D Potassium Channel Kv1.1; Chain A 118 273 IPR011333 -
Aed10g0327 311 PANTHER OS08G0495500 PROTEIN-RELATED 1 311 IPR044714 -
Aed10g0327 311 SUPERFAMILY POZ domain 127 242 IPR011333 -
Aed10g0327 311 CDD BTB_POZ_ZBTB_KLHL-like 144 227 - -
Aed10g0327 311 PANTHER BTB/POZ DOMAIN PLANT PROTEIN 1 311 - -
Aed10g0327 311 ProSiteProfiles BTB domain profile. 145 205 IPR000210 GO:0005515
Aed10g0327 311 Pfam BTB/POZ domain 138 242 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0327 Aed-Chr10 2625923 2627746 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Aed10g0327 BTB 1.9e-23 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0327 K10523 - gmx:100787262 580.096