Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0320 ATGGAGTTTGTGGATGCCAGAAAACTACAGTTACAACCGCAGCAACATTTTCATGTGTTGGCAGTGGACGACAGTGTCATAGATAGGAAGCTTTTGGAGAGGCTCCTTAGAGGTTCTTCATGCAAAGTTACCTGCGTGGACTCTGGAGACAAGGCTTTGAAATATCTTGGGTTAATTGATGATACTTCTTCAACCTCTTTAGAATCAGCATCTTTTCCTGATCCACCTCAACCATTAGAGCAAGTCGAGGGAATCAAAGTGAATTTGATCATGACAGACTATTGCATGCCTGGGATGAGTGGCTATGATTTACTCAAACGAGTCAAGGGATCTTCTTGGAAAGATGTTCCAGTCGTGATCATGTCATCAGAAAATGTACCTTCCAGAATCAGCATGTGCTTAGAAGAAGGGGCAGAAGAGTTTCTATTGAAGCCTCTTCAGTTATCAGATTTGGATAAGCTTCAGCAGTACTTTCTGAAATCCTCCTCCCTTGACAATTCTTGTGAAAAAGAATCTGCAGCTAACAGTTCCATAGATTTGGACAATGACGACAATGTCGTCATCAACAACAACAATAATTGTATTAGCAAAAGGAAGGCCATGTCTCCTGAGCCTCACCAGGAGGATAGATCAAGACCAAAAATGAAAGAGTTAGCGGTGGTGTAA 666 0.4189 MEFVDARKLQLQPQQHFHVLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLIDDTSSTSLESASFPDPPQPLEQVEGIKVNLIMTDYCMPGMSGYDLLKRVKGSSWKDVPVVIMSSENVPSRISMCLEEGAEEFLLKPLQLSDLDKLQQYFLKSSSLDNSCEKESAANSSIDLDNDDNVVINNNNNCISKRKAMSPEPHQEDRSRPKMKELAVV 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0320 221 CDD REC_typeA_ARR 19 154 - -
Aed10g0320 221 MobiDBLite consensus disorder prediction 196 221 - -
Aed10g0320 221 PANTHER TWO-COMPONENT RESPONSE REGULATOR 10 220 IPR045279 GO:0009736
Aed10g0320 221 SUPERFAMILY CheY-like 17 161 IPR011006 -
Aed10g0320 221 SMART REC_2 17 155 IPR001789 GO:0000160
Aed10g0320 221 ProSiteProfiles Response regulatory domain profile. 18 159 IPR001789 GO:0000160
Aed10g0320 221 PANTHER TWO-COMPONENT RESPONSE REGULATOR ORR4 10 220 - -
Aed10g0320 221 MobiDBLite consensus disorder prediction 201 221 - -
Aed10g0320 221 Pfam Response regulator receiver domain 69 153 IPR001789 GO:0000160
Aed10g0320 221 Gene3D - 18 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0320 Aed-Chr10 2559997 2564627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0320 9 161 Response Regulator Gene Family AT3G57040 60.390 2.30e-59 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aed10g0320 Response_reg 8.3e-16 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0320 K14492 - gmx:100786187 343.969