Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0315 ATGTCGGGTGGGAAGATACAGTCAGAGAAGAAGAATGTACTGTTTGACGCTGAAGCGGCTTCGTCGTTGGTGAAGGAGTTGAGGGACAACTTCGGCTCCGGAACGACGCGGAGCTATGAATGGAGAGTGTCGCAGGTGAAGGCTCTGTTGAAGGCGGTGGCTGATAACGAGGACCAGATCGTCGACGCTCTTCGTTCCGACCTAGCCAAGCCTCCACTCGAAACCGTCGTCTACGAGATTGGTATGTTTAAAAACTCATGTGAAGTCATACTGAAGGAATTGAAACAGTGGATGAAGCCAGAAAAGGTCAAAACATCAATTAGAACTTTTCCTTCCTCAGCTGAAATAGCCCCCGAACCATTGGGTGTTGTGTTGGTCATCTCTGCATGGAACTATCCAATTTTGTTGTCTCTTGATCCCGTGGTTGGAGCAATAGCAGCTGGCAATGCTGTGGTTCTAAAACCATCAGAAATTGCTCCAGCCTCATCATCACTACTATTAAAATTGTTAGAGAAGTATATGGACAAGTCATTTATAAGAGTTGTGGAGGGGGCAGTTGATGAAACAACCGCACTATTGCAACAGAAGTGGGACAAGATTTTCTACACAGGTAATGGAAAAGTGGGAAGAATAGTGATGACTGCAGCTGCAAAACACCTTACACCAGTTGTGCTGGAGCTTGGAGGAAAATCTCCAGTTGTTGTTGATTCAAATGTCGATTTGCAGATAGCAGCTAGGCGAATAATTTCTGGCAAGTGGGGATTGAACAGTGGACAAGCTTGTATTTCTCCAGATTATGTTATAACAACAAAAGACTGCGCTCCCAAGTTGGTGGATGCCTTAAAGACTGAATTGGAGAAGTGTTATGGAAAGAACCCGTTGGAATCAGAAGATTTGTCTCGGATTGTGACTTCCAACCACTTTGCTCGGTTGTCAAAGATGTTGAATGATGATAAGGTTTCTGGCAAGATTGTTTATGGAGGTGAAAAGGATGAAAAGAAATTAAGGATTGCTCCTACTCTTTTATTGGATGTTCCCCAAGATTCTCTGATAATGGGTGAGGAGATATTTGGTCCATTGCTTCCCATCATCACGGTGAATAAAGTGGAAGAAAGTATAGATTTGATCAACTCGGGAACAAAACCTCTCGCTGCATATATATTTACAAGCAACAAGAAGTTAAAGGAGCAGTTCGTGATGAATGTTCCTGCAGGGGGTTTGCTTGTCAATGACACCACCTTACATCTTGTGGTTGATACATTACCATTTGGGGGAGTTGGGGAGAGTGGAATGGGTGCATATCATGGGAAATTCTCATTTGATGCTTTTACACACAAAAAAGCAGTTCTTTATCGCAGTTTTGCTGGTGATTCTTCAATAAGGTACCCACCATACACAGATACAAAGCTGAGATTGATGAAGGCTCTCATCGGTGGTCGTTTCCTCGGAATAATTCGTGCTCTTTTCGGGTGGTCCTAA 1479 0.4361 MSGGKIQSEKKNVLFDAEAASSLVKELRDNFGSGTTRSYEWRVSQVKALLKAVADNEDQIVDALRSDLAKPPLETVVYEIGMFKNSCEVILKELKQWMKPEKVKTSIRTFPSSAEIAPEPLGVVLVISAWNYPILLSLDPVVGAIAAGNAVVLKPSEIAPASSSLLLKLLEKYMDKSFIRVVEGAVDETTALLQQKWDKIFYTGNGKVGRIVMTAAAKHLTPVVLELGGKSPVVVDSNVDLQIAARRIISGKWGLNSGQACISPDYVITTKDCAPKLVDALKTELEKCYGKNPLESEDLSRIVTSNHFARLSKMLNDDKVSGKIVYGGEKDEKKLRIAPTLLLDVPQDSLIMGEEIFGPLLPIITVNKVEESIDLINSGTKPLAAYIFTSNKKLKEQFVMNVPAGGLLVNDTTLHLVVDTLPFGGVGESGMGAYHGKFSFDAFTHKKAVLYRSFAGDSSIRYPPYTDTKLRLMKALIGGRFLGIIRALFGWS 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0315 492 PANTHER ALDEHYDE DEHYDROGENASE 8 492 - -
Aed10g0315 492 PIRSF ALDH 6 485 IPR012394 GO:0006081
Aed10g0315 492 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 28 447 IPR016162 GO:0016491
Aed10g0315 492 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 225 232 IPR029510 GO:0016491
Aed10g0315 492 SUPERFAMILY ALDH-like 23 458 IPR016161 GO:0016491
Aed10g0315 492 Pfam Aldehyde dehydrogenase family 16 449 IPR015590 GO:0016491
Aed10g0315 492 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 229 429 IPR016163 GO:0016620
Aed10g0315 492 PANTHER ALDEHYDE DEHYDROGENASE 8 492 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0315 Aed-Chr10 2519596 2523079 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0315 80 490 Aldehyde Dehydrogenase Gene Family AT1G44170 70.803 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0315 K00128 - gmx:100783726 912.909