Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0294 ATGAATTCCACCGAGATGGACGCCACCGTCACTGAGTCCAGTCCCTCCAGCAATGCCGCCGAACCGCTGCGCCGTAGTGTCCGCCGCCGGCTGGTCCAGTCGACGCTCTTCCCTCACAAACCACCGGCACCCGACAAAGAGGACGAGCGAGACGTGGATTACTCCGACGCTGAGAATCACAAGAAGAGGAAGAAGCCCAAGGCCAAAACCAATCCTCCCAAAAAAGTGTCCAAGAATGCGACGCCAAAGAAAAATGCGGCGGCTAATGGGACTAAGTGGTCAACTTCGCGGCAAGTTTTGGCTGATTCCGATCAGGTCAATGCACCGGTGCATAATTTATTTTTAGAAGCGAAATTAGCTGCCGAGGAAGATTCAAGGATTTTTGCAGGGCGGCAGATACATCCATTTTTTTCACTGGGGAAGGCAGGGAAGAAAGTTCAGGACGTGGCCGATTCAAGAAGTATTTTATGGACAACAAAGAGTGAGGATGAAAGGACTACCTGTGGCCCCATTCATGTATTTGAAAATACTCAGGATGATACCTCATCTCTTGATTGGAGAAACTGGACGTTTTTGGAGAATACCACCTCTATGAATTATGGTCCAGAAAGTTTAAATTCATCTGTTTTGGAGGGTTCTGTTGAATCCTTAAATTTTGATAAGCTTCGTAGTTCCTTGGATCCATCAGGCACTTCAATTTCTCAGAATGTTGTATCTTCAGATAGACTTTGTATACATCCAGATAATCAGGTAGAAGTATCACCATCAAACTCAGCTTCACTAGCAGAGCAAATATGTCCTCTGACGTGTGAAGATGCCAAACTGTACATGGAGGTGGATGAATCTGTTACAACAACTGTGCAAGCTGACATTTTTAGAAAGTCAGATACTGAACCACTGAGTAGATTTCTTCAAGAAAGTATGAGATCGTATTACCGTAGTTGTGTAGATAAGGCAGAGAACAGCTTATGGACATACAAATACAAGCCAACAAAGGCTGTTGAGGTATGTGGTAATGATGAATCTGTGAACTTCTTACGTGACTGGTTACATCTTTGGCATGCAAGACGTTATAAAAGCAGGAAGGATATCTCTGACATGGATAAAAGTGATGTGCAAGATGTTGATGATGACGATGATGATTATAAAGGCTCTTATAGTGACTATGACTCAGAAGATATAAATGAGGAGGATCCCCTGCAGAATGTGCTTTTAATTAAAGGACCAATTGGGAGTGGCAAGTCTGCAGCAGTCTATGCTTGTGCTGAAGAGCAAGGGTTTAAAATTTTTGAGCTCAATGCATCAGATTGTAGAAATGGGACTTCTGTCAGGAATTATTTTGGAGATACTCTTGGTTCACTTGGGTTCAAAAGGTCATCAGAAAACACTGCAAGTTCACAGAAGAAAACTACAAAGTTTCCCCCAGCTCTGGCTTTGCTCAGTGGTAAAGCTGCTGCTGATGTGAATGGTGATGGGGTGGATGAACTGATAACCATATCTGATGATGAAGCTCATAGCCCCAGTGGATCATCACGGAAGTTACTTAGCAAACACAATGTAGTTGCATCATGTGATAAAGTGCAAACTTTAATTCTAATTGAGGACGTGGACATCCTTTTTCCTGAAGATCGTGGATGTATTGCTGCCATACAACGGATTGCTGAGACTGCAAAGGGGCCAATTATATTGACCAGTAATAGTGATAATCCTGGCCTGCCAGATAATTTTGATATGCTCCATGTTTCATTTGTGTTGCCATCGTCAAAGGAGTTGCTTTGCCATTTGTACACTATTTGTCTCACTGAAGGAGTCAACATCCATCCTCTTTTACTGGAGAAGTTTATACATTCTTGTGATGGAGATATCCGAAAATCCATTTTCCATCTTCAGTTCTGGTTTCAGAGTAAAAGATTTCAAAAAGATAAAGATGGAAAGGCACAAACACGATGTGGCTCGCTTCCATTTGATCTTGAGCTTAGCCATCAGATACTACCAAAGATAATGCCCTGGGATTTCCCCTCAAAGATATCCGAACTAATTGAGAATGAAATTGCCAAATCAACAAATAAAATGGAAGAAAACTCTACAGGGATGGTTACAGAAGAGCTTCTTCACATAAATGAACAGAAAAATGATTTAAATGTGCAGTGTATGGAAGCTGATTATATAAAGGCCAAGAAAGTGGAGATGATTAAGAGAAATGGTTCTTTGAAAGATTACAGTGAGCTTGAAATTCAATATAATGCTACTTCTGAGTTTTCCAATTCTTCTGGTTCCCCACTTACATCCTCTCGGAAAAATGGTCGAAGGAAACTTGTAGTTATGTCCTCTGATTCTGAGGATGAGGATTCAAATAATGGATGTCCTGTAGACACACATGATGAAGCTAATACGAGACAATCAATGAAAGAAAATAATGGATGTCCCTCTGAGTTTCAATTAAACTACCCCAGCACACCATTTCGCAAATTGGTTTGTTCTGAATTGGAGCATGCAGAGGAGGAACATTTTAAATATTCTGAAACAGCTGATGATAATAATGAAACATGTAAATCATTAGATGTATCCTGTGTGCCAGAATCAACTTTTGTTCCTGAGACTGAAATTGAAAATGGAACAGAGTCAATGTCTGGAGCAGTGTCTTCTGGCCCTCTTGTTGGTCCTTGGGAAGTTTCTGTGAATAATGAGTTGAAACCACTCACCTTCAGTATTCGTAGGCGCTTAACAAAATTGTCACAAAATCCAGATTTGTTTGTGGATACTGAAATTTCAGACCATTCTTGTAAACCGGTTTGCCAAGATGTTCTAGATGATGTACATATGGAAACAATTGTTAATGTGATGGATGAGTGCAGTCGTGTGGATTTCAAACTAAAGCCAACATTTTTGCAGTCCAAACCATTAACAGACTCAGAAAAGATACAAAAGTTGTGGAGAGATCTTCGCGAGCGTCACATGGATTTAAGACAGAATTCTAACTCAGAACAGCTAGGTGCTTTTCAAGTTGTTAAACTTGCTAGTGGACTGAACAATCTAATTTCAGAAGCTGACTTATTCCATAAACGTGATATTATGGAACCTTCAACGTTCCTTTCTGATGAATCCACGTCTAGTTGGTATCATGAGCAAATAATGGCGTCCACTGTTGTGGAACATGGGTTTTGCTTTTACACTAAGCTTATAACAGATGAAGCATCAAAGTTGGGTTGTGCAAATTGTGCTGATATTACTTCTGAGATGTTGGCTTCCTCCATTAAATTATCCGGCCAGGATCTCACGAAAAGCAATGTTATCAATGCTGGAAAGGAAGTTGAGTGGAACAGACTAATAAATAGTATGCAAAAGAGTGAAAACAAAACATCTCAGTTGAAGGCCATCCAATCCATTGTTCCTGCAAGAATATCCTTGGCATTAAAAGGCAATGCATTCAATGAATATCTATCTTCATTATGCCAAATTTCAAGGTCAGAAGCTTCCCGCATTTCACAAGAAGTTGAAAACAAGAGAAGAGGAAGGGTACGTGGTTTTCACCATTACTTGAGCAGATGTACCACGCTGTCTCCTGAAGATATATCTTTGGTGAGTGAGGGTAATCTGTACAGAAAGAATTCTTCACAACATACAACAAACATAGGCGGCAAATTATAA 3648 0.4052 MNSTEMDATVTESSPSSNAAEPLRRSVRRRLVQSTLFPHKPPAPDKEDERDVDYSDAENHKKRKKPKAKTNPPKKVSKNATPKKNAAANGTKWSTSRQVLADSDQVNAPVHNLFLEAKLAAEEDSRIFAGRQIHPFFSLGKAGKKVQDVADSRSILWTTKSEDERTTCGPIHVFENTQDDTSSLDWRNWTFLENTTSMNYGPESLNSSVLEGSVESLNFDKLRSSLDPSGTSISQNVVSSDRLCIHPDNQVEVSPSNSASLAEQICPLTCEDAKLYMEVDESVTTTVQADIFRKSDTEPLSRFLQESMRSYYRSCVDKAENSLWTYKYKPTKAVEVCGNDESVNFLRDWLHLWHARRYKSRKDISDMDKSDVQDVDDDDDDYKGSYSDYDSEDINEEDPLQNVLLIKGPIGSGKSAAVYACAEEQGFKIFELNASDCRNGTSVRNYFGDTLGSLGFKRSSENTASSQKKTTKFPPALALLSGKAAADVNGDGVDELITISDDEAHSPSGSSRKLLSKHNVVASCDKVQTLILIEDVDILFPEDRGCIAAIQRIAETAKGPIILTSNSDNPGLPDNFDMLHVSFVLPSSKELLCHLYTICLTEGVNIHPLLLEKFIHSCDGDIRKSIFHLQFWFQSKRFQKDKDGKAQTRCGSLPFDLELSHQILPKIMPWDFPSKISELIENEIAKSTNKMEENSTGMVTEELLHINEQKNDLNVQCMEADYIKAKKVEMIKRNGSLKDYSELEIQYNATSEFSNSSGSPLTSSRKNGRRKLVVMSSDSEDEDSNNGCPVDTHDEANTRQSMKENNGCPSEFQLNYPSTPFRKLVCSELEHAEEEHFKYSETADDNNETCKSLDVSCVPESTFVPETEIENGTESMSGAVSSGPLVGPWEVSVNNELKPLTFSIRRRLTKLSQNPDLFVDTEISDHSCKPVCQDVLDDVHMETIVNVMDECSRVDFKLKPTFLQSKPLTDSEKIQKLWRDLRERHMDLRQNSNSEQLGAFQVVKLASGLNNLISEADLFHKRDIMEPSTFLSDESTSSWYHEQIMASTVVEHGFCFYTKLITDEASKLGCANCADITSEMLASSIKLSGQDLTKSNVINAGKEVEWNRLINSMQKSENKTSQLKAIQSIVPARISLALKGNAFNEYLSSLCQISRSEASRISQEVENKRRGRVRGFHHYLSRCTTLSPEDISLVSEGNLYRKNSSQHTTNIGGKL 1215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0294 1215 MobiDBLite consensus disorder prediction 1 94 - -
Aed10g0294 1215 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 79 1211 IPR004582 GO:0006281
Aed10g0294 1215 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 322 640 IPR027417 -
Aed10g0294 1215 MobiDBLite consensus disorder prediction 74 94 - -
Aed10g0294 1215 Gene3D - 586 649 - -
Aed10g0294 1215 PANTHER CHECKPOINT PROTEIN RAD17/RAD24-RELATED 79 1211 - -
Aed10g0294 1215 MobiDBLite consensus disorder prediction 790 811 - -
Aed10g0294 1215 MobiDBLite consensus disorder prediction 775 811 - -
Aed10g0294 1215 MobiDBLite consensus disorder prediction 41 61 - -
Aed10g0294 1215 CDD AAA 396 458 - -
Aed10g0294 1215 MobiDBLite consensus disorder prediction 1 21 - -
Aed10g0294 1215 MobiDBLite consensus disorder prediction 370 393 - -
Aed10g0294 1215 MobiDBLite consensus disorder prediction 367 393 - -
Aed10g0294 1215 Gene3D - 321 576 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0294 Aed-Chr10 2389431 2397521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0294 320 631 Core DNA Replication Machinery Family AT5G22010 23.602 3.88e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0294 - - gmx:100784209 1965.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0294 10 2389431 2397521 Aed10g0294 10 2389431 2397521 ECH