Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0290 ATGGAAGACCAAAATAGTAGTGGAAAGTTTAGCCAAGGGCTTCGCAAGATGAAGCCTTACCTTGCTATATTGTCCCTTCAATTTGGCTACTCGGGGATGTATATCATCACTATGGTTTCTTTCAAACATGGAATGAGTCATTGGATACTCTCAGTGTATCGTCATGTAGTTGCTGCTATTATTATAATCCCTTTTGCACTTGTCCTTGAAAGAAAAATAAGACCTAAGATGACTCTTCCCATCTTCCTGAGGATAGTGGCACTTGGTTTCCTCGAGCCAGTGCTAGATCAGAACTTGTACAACATGGGGATGAAAATGACTTCGACAACGTTTGCATCTGCCACAGTTAATGTCCTCCCGGCCATTACTTTTGTAATGGCACTCATTTTCAGGCTAGAGAAGGTGAACTTGAGAAAATTTCACAGCCTAGCGAAGGTGATTGGAACAGTTATAACAGTTTCAGGAGCCATGGTTATGACTCTGTACAAAGGCCCTGCCTTTCAAATCATAAAGGGTGGAGGAGCCATCAGCAACCATAGCAACTCTAGCACCACTGAACCAGCCTCTGACCAGCAGCACTGGATAATTGGCACTCTATATCTTATATCAAGTTGTGCTAGTTGGGCTGGCTTCTTCATTTTGCAATCATTCACTTTGAAGAAGTACCCGGCAGAGCTTTCACTCACAGCTTGGATTTGCGTGATGGGCATTATTGAAGGTTCAATCGCATCCCTTATATTCGAACGAGACTTTAGTGTGTGGGCCATAGGCTGGGACTCAAGGCTTCTTGCTTGTGTTTACTCTGGGGTGATTTGTTCTGGAATGGCATACTATGTACAAGGGGTTGTAACAAGGGAACGTGGACCAGTGTTTGTGACTTCTTTCAGTCCTCTATGTATGATTATCACCGCTGCATTGGGTTCCCTTGTCTTAGCTGAGCAAGTTCATCTAGGAAGTATATTTGGGGCTATTTTGATTGTGTGCGGACTTTACACTGTGGTGTGGGGAAAAAGCAAAGACCGTGAGAGCACAACAGAAACAGAGAAAGGTGAAAGACAAGAATTGCCAATAAAGAACGGTACAAAACCAGCGTCAGACATGTTTGATGGCATTGAAATCAATGTTCCTGCTGAAATGTTCAAGAAAGGGGGGGGAGGGAAAAATGTGGCTGAGCCACCATCATCATGA 1188 0.4377 MEDQNSSGKFSQGLRKMKPYLAILSLQFGYSGMYIITMVSFKHGMSHWILSVYRHVVAAIIIIPFALVLERKIRPKMTLPIFLRIVALGFLEPVLDQNLYNMGMKMTSTTFASATVNVLPAITFVMALIFRLEKVNLRKFHSLAKVIGTVITVSGAMVMTLYKGPAFQIIKGGGAISNHSNSSTTEPASDQQHWIIGTLYLISSCASWAGFFILQSFTLKKYPAELSLTAWICVMGIIEGSIASLIFERDFSVWAIGWDSRLLACVYSGVICSGMAYYVQGVVTRERGPVFVTSFSPLCMIITAALGSLVLAEQVHLGSIFGAILIVCGLYTVVWGKSKDRESTTETEKGERQELPIKNGTKPASDMFDGIEINVPAEMFKKGGGGKNVAEPPSS 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0290 395 PANTHER WAT1-RELATED PROTEIN 13 366 IPR030184 GO:0016021|GO:0022857
Aed10g0290 395 MobiDBLite consensus disorder prediction 341 368 - -
Aed10g0290 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 161 - -
Aed10g0290 395 Pfam EamA-like transporter family 196 334 IPR000620 GO:0016020|GO:0016021
Aed10g0290 395 Pfam EamA-like transporter family 24 152 IPR000620 GO:0016020|GO:0016021
Aed10g0290 395 MobiDBLite consensus disorder prediction 341 356 - -
Aed10g0290 395 PANTHER WAT1-RELATED PROTEIN 13 366 - -
Aed10g0290 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 254 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0290 Aed-Chr10 2364289 2367502 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0290 14 359 Nodulin-like Gene Family AT4G08300 68.786 4.19e-173 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0290 - - gmx:100783910 722.62