Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0289 ATGGGTACGTGGTTCACAAATGCAAAACCGTATCTGATGTTATTGGCAGTTCAATTTGGTTCTGCAGGAATGTTCATATTTGCCATGGACGCTATAAAGAAGGGTATGAGCCATTACGTCTTCATCGTCTATCGTAATGCCATCGCCTCTATAACTCTCGCTCCCTTCGCATTTGTTCTTGAAAGGAAAGTTAGGCCCAAGATGACTGTACGGATATTTTCTGAGATTATGGCGCTGGCTTTCTTCGAAATAATACTGGATCAGTGCTTTGCCCTATTGGGCATGAAATTCACGTCGGCATCTTTCCTATCTGCTGTCATGAACTCCGCACCCTCTGTTACTTTTGTGTTGGCTGTCATTCTAAGATTGGAGCACATGAAGATTAAGGAGGTGGCATGTCAAGCCAAAGTGATTGGAACAATAGTAACTTTTGGAGGCACCTTGCTAATGGCACTATACAAAGGCCCCATTATTAGTGTTATGAGATCATCTTCAACTACCAGCCACATCCACGCTCATAATATTGTGAACAACAACCCCACCGGTAACCACTGGCTCCTGGGGACATGTTTCCTCCTCATTGGTTGTGCCGGTTTTTCTGCATTTTACATATTACAAACCATAACATTGAGGAAATACCCGACAGAGATGTCCCTGGCCACTTGGGTTTGCTTTTTTGGTGCACTTCAAAGCTCTGTTGTTGCAGCCATCGCAGAACGGCACCACCCTCATGCTTGGGCCATTGGTTGGGATACTCGACTCTTTGCTCCTGCTTACGCGGGAATAGTTACGTCTGGAGTTCAGTATTACATTCAAGGCATGGTCATAAAATCTATGGGCCCAGTTATTGTGACTGCTTTTAATCCCCTTCGTATGATCATTATTACCACCTTGGCCTGCATCGTCCTATCTGAAAAACTCTACCTTGGAAGTATTATTGGAGCGATAGTTGTGGTTCTTGGGCTGTATTTTGTTGTGTGGGGAAAATATAAAGAATACCACGGAAGAAGATCAATGCCACCATCCCCTACAAAGGATAATAACTCTCCAGAAGACCAACGACAATTACCGGTCACAGCTCCTAAGTATGATACCAATGATAATAAGGGTTAA 1113 0.4385 MGTWFTNAKPYLMLLAVQFGSAGMFIFAMDAIKKGMSHYVFIVYRNAIASITLAPFAFVLERKVRPKMTVRIFSEIMALAFFEIILDQCFALLGMKFTSASFLSAVMNSAPSVTFVLAVILRLEHMKIKEVACQAKVIGTIVTFGGTLLMALYKGPIISVMRSSSTTSHIHAHNIVNNNPTGNHWLLGTCFLLIGCAGFSAFYILQTITLRKYPTEMSLATWVCFFGALQSSVVAAIAERHHPHAWAIGWDTRLFAPAYAGIVTSGVQYYIQGMVIKSMGPVIVTAFNPLRMIIITTLACIVLSEKLYLGSIIGAIVVVLGLYFVVWGKYKEYHGRRSMPPSPTKDNNSPEDQRQLPVTAPKYDTNDNKG 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0289 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 154 - -
Aed10g0289 370 MobiDBLite consensus disorder prediction 341 362 - -
Aed10g0289 370 Pfam EamA-like transporter family 10 150 IPR000620 GO:0016020|GO:0016021
Aed10g0289 370 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020|GO:0016021
Aed10g0289 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 331 - -
Aed10g0289 370 MobiDBLite consensus disorder prediction 335 370 - -
Aed10g0289 370 PANTHER WAT1-RELATED PROTEIN 7 360 - -
Aed10g0289 370 PANTHER WAT1-RELATED PROTEIN 7 360 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0289 Aed-Chr10 2348401 2352441 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0289 9 369 Nodulin-like Gene Family AT1G44800 43.324 9.83e-106 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0289 - - gmx:102665912 660.988