Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0288 ATGGTGTTGCATTTGCATATATACAGAATAATACTGGATCAATGCTTCGCCCTCTTGGGCATGAAGTTCACGTCGGCATCTTTCCTATCTGCTGTCATGAACTCTGCGCCCTCCGTTACTTTTTTGTTGGCTGTCATTCTAAAATTGGAGCACATGAAGATGAAGGAGGTAACATGTCAAGCCAAAGTGATAGGCACAGCAATAGCTTTTGGAGGCACAATGCTAATGGCAATATACAAAGGCCCTGTCATAACATTGAGAAAATACCCAGCAGAGATGTCCCTAGCCACTTGGGTTTGCTTTGTTGGTGCACTTCAAAGTTCTATTGTAGCAGTCTTCGTAGAACGACACCACCCTCATGCTTGGGCCCTTGCTTGGGATACACGACTCTTCGCTCCTGCTTACGCGGGAATAGTTTCATCTGGAGTTCAGTATTACATACAAGGCGTGGTCATAAAATCCATGGGTCCAGTTATTGTGACTGCTTTTAATCCCCTTCGTATGATCATTATTACCACCTTGGCCTGCATAGTCCTATCTGAAAAACTCTACCTTGGAAGTATTATTGGAGCAATAGTTGTGGTTCTTGGACTCTATCTAGTTGTGTGGGGAAAATATAAAGAATGCCACGGAAGAATGGCACCGTCCCCTGCAAATGATAACTCTCCAGAAGATCAACGGCAGCTACCTGTCACAGCTCCTAGCTAG 708 0.4463 MVLHLHIYRIILDQCFALLGMKFTSASFLSAVMNSAPSVTFLLAVILKLEHMKMKEVTCQAKVIGTAIAFGGTMLMAIYKGPVITLRKYPAEMSLATWVCFVGALQSSIVAVFVERHHPHAWALAWDTRLFAPAYAGIVSSGVQYYIQGVVIKSMGPVIVTAFNPLRMIIITTLACIVLSEKLYLGSIIGAIVVVLGLYLVVWGKYKECHGRMAPSPANDNSPEDQRQLPVTAPS 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0288 235 PANTHER WAT1-RELATED PROTEIN 83 231 IPR030184 GO:0016021|GO:0022857
Aed10g0288 235 Pfam EamA-like transporter family 84 202 IPR000620 GO:0016020|GO:0016021
Aed10g0288 235 MobiDBLite consensus disorder prediction 219 235 - -
Aed10g0288 235 SUPERFAMILY Multidrug resistance efflux transporter EmrE 100 206 - -
Aed10g0288 235 PANTHER WAT1-RELATED PROTEIN 3 84 IPR030184 GO:0016021|GO:0022857
Aed10g0288 235 PANTHER WAT1-RELATED PROTEIN 83 231 - -
Aed10g0288 235 MobiDBLite consensus disorder prediction 214 235 - -
Aed10g0288 235 PANTHER WAT1-RELATED PROTEIN 3 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0288 Aed-Chr10 2343940 2345891 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0288 2 234 Nodulin-like Gene Family AT2G39510 38.351 2.31e-66 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0288 - - gmx:100776215 371.318