Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0283 ATGGTTAAGTCAGAGCAGAAGATCAAAACAGAAGCATCATCAAAGGCAATGCGGTCTCTATCCTTATCCTCAGCATCAGATAGCAACAAGAAGAAGAAGAAGTACAAGGGAGTGAGAATGAGGAGCTGGGGGTCATGGGTTTCAGAGATTAGAGCACCAAACCAGAAAACAAGAATATGGTTAGGATCTTATTCAACCCCAGAGGCTGCAGCCAGAGCCTATGATGCTGCACTTCTATGCCTTAAAGGCTCCTCAGCAAATCTCAACTTCCCATTAACCTCTTCTTCACAACACATTCACATTCCTGGAGATGCTGTCATGTCCCCCAAATCAATCCAAAGAGCTGCTGCTGCAGCTGCTGCAAACACTTTCATTCACAATGCCACCACTCCACCTGCTTCAACTTCATCATCATCATTGGCCTCTAATTCTCCCTCAGATCAAATCGACGACGACGCCTCGCTGATTTCGTCGTCTTTCGAAGCCTACACCACTAGTCCTGAATCTGATCAAGCAAATCAATCAATGGCTGTGAATGTGATGATGGAGCCTAATTGGTACACCTTTGGTGATGATGGTCTTGATCAGATGCTAAGTGCTTCTTTCTTCGATGTTGATTCGTCCCATCTGCTTGATGATCTATACGAAGAAAGTGACATTCGATTGTGGAGCTTCTGCTAA 681 0.4493 MVKSEQKIKTEASSKAMRSLSLSSASDSNKKKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTPEAAARAYDAALLCLKGSSANLNFPLTSSSQHIHIPGDAVMSPKSIQRAAAAAAANTFIHNATTPPASTSSSSLASNSPSDQIDDDASLISSSFEAYTTSPESDQANQSMAVNVMMEPNWYTFGDDGLDQMLSASFFDVDSSHLLDDLYEESDIRLWSFC 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0283 226 CDD AP2 37 91 IPR001471 GO:0003700|GO:0006355
Aed10g0283 226 SUPERFAMILY DNA-binding domain 34 92 IPR016177 GO:0003677
Aed10g0283 226 SMART rav1_2 34 97 IPR001471 GO:0003700|GO:0006355
Aed10g0283 226 MobiDBLite consensus disorder prediction 1 36 - -
Aed10g0283 226 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 9 226 - -
Aed10g0283 226 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF014 9 226 - -
Aed10g0283 226 Pfam AP2 domain 34 83 IPR001471 GO:0003700|GO:0006355
Aed10g0283 226 ProSiteProfiles AP2/ERF domain profile. 34 91 IPR001471 GO:0003700|GO:0006355
Aed10g0283 226 PRINTS Ethylene responsive element binding protein signature 35 46 IPR001471 GO:0003700|GO:0006355
Aed10g0283 226 PRINTS Ethylene responsive element binding protein signature 57 73 IPR001471 GO:0003700|GO:0006355
Aed10g0283 226 Gene3D AP2/ERF domain 33 93 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0283 Aed-Chr10 2288758 2289438 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0283 1 225 AP2-EREBP Transcription Factor Family AT1G21910 43.825 7.05e-47 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed10g0283 AP2 2.9e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0283 - - gmx:100819512 271.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0283 10 2288758 2289438 Aed10g0283 10 2288758 2289438 ECH