Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0278 ATGGAAATGGAAATGGACATGGACATGGTTGCTATCCAAAACCTCGACTTCTCCGGATACAGCACCATCACCAACACCACCCCCTCTTCTGATGATGACTACGGTTGCAACTGGAACCATTGGTCCCCCCTCGTCAACTGGGACGCCTTCACCGGCGCCAACGACGACTTCCACCAAATCATCGACTCCATCATGTGCGACGGCGCAGCTGCAGAAGACAACCTCAGCCCCTCAGAAGACCACGGCGCCAGCAACTCCCCCTCCGTCTCAGTCTCCATCACGGAGGAGGACGAGGAAGAAACTCACGCCGGCGACGATTCGAAGGGCCTGAGACTCATCCATCTTCTGATGGCCGCCGCGGAGGCCCTGACCGGCGCCACCAAGAGCCGCGAGCTCGCTCGAGTGATATTGGTTCGGCTCAAGGAGTTGGTGTCCCACGCGGCGCCGCCTCACGGCTCCAACATGGAGAGGCTCGCCGCCTACTTCACCAACGCCCTGCAGGGTCTGCTAGAAGGCGCCGGGGGTGCGCACAACAACAAACATCACTACAATAACATCACGTCATCATGTGGGCCCCACCACCACCACAACCACCGCGACGATCAGCATCATCATCATAATCAAAACGACACCCTCGCAGCCTTCCAACTGCTCCAGGACATGTCTCCCTACGTCAAGTTCGGACACTTCACCGCCAACCAGGCCATAATTGAGGCCGTGGCCCACGAGCGCCGAGTCCACATCGTCGATTACGACATCATGGAAGGGGTCCAGTGGGCCTCCCTCATGCAGGCCCTCGCCTCCAACAAAACAGGCCCCCCGGGCCCACACCTTCGAATCACCGCATTGTCCCGAACCGGCTCCGGACGCCGCTCCATAGCCACCGTCCAAGAAACCGGGCGTCGCTTGACGGCCTTCGCCGCCTCCCTAGGCCAGCCGTTTTCCTTCCACCATTGCAGGTTGGACCCCGACGAAACGTTTAAAGCTTCGTCTCTGAAGCTGGTTCGCGGAGAGGCTTTGGTTTTCAACTGCATGCTAAACTTACCGCACCTGAGTTACCGCGCGCCTGATTCGGTAGCGTCGTTTTTGAGCGGAGCCAAAGCGTTGAAGCCGAGGCTGGTGACTTTAGTTGAGGAGGAGGTGGGGTCCAGTACTACTGTTGGAGGGTTCGTGGGGCGGTTCATGGACTCGCTGCATCACTATTCAGCGGTGTTTGATTCGCTGGAGGCTGGGTTTCCGATGCAGGGCCGGGCCAGGGCTCTTGTGGAGCGGGTTTTCTTGGGCCCCAGGATAGTGGGCTCGCTGGCCCGGATATACCGGACTGGGGAAGAGAAGGAGAGAGGGTCGTGGGGTGAGTGGTTGGGTGCGGCGGGGTTCAGGAGAGTTCCGATGAGCTTTGCGAATCATTGCCAAGCGAAGCTGTTGATTGGTCTTTTCAACGACGGGTATCGGGTTGAGGAGTTTGGGACTAATAACTTAGTCTTGGATTGGAAATCTAGGCGCTTGCTTTCGGCCTCGCTTTGGACCTCTTCTTCCTCCGACTCTCATCAATCATCATTAACCTAG 1566 0.5811 MEMEMDMDMVAIQNLDFSGYSTITNTTPSSDDDYGCNWNHWSPLVNWDAFTGANDDFHQIIDSIMCDGAAAEDNLSPSEDHGASNSPSVSVSITEEDEEETHAGDDSKGLRLIHLLMAAAEALTGATKSRELARVILVRLKELVSHAAPPHGSNMERLAAYFTNALQGLLEGAGGAHNNKHHYNNITSSCGPHHHHNHRDDQHHHHNQNDTLAAFQLLQDMSPYVKFGHFTANQAIIEAVAHERRVHIVDYDIMEGVQWASLMQALASNKTGPPGPHLRITALSRTGSGRRSIATVQETGRRLTAFAASLGQPFSFHHCRLDPDETFKASSLKLVRGEALVFNCMLNLPHLSYRAPDSVASFLSGAKALKPRLVTLVEEEVGSSTTVGGFVGRFMDSLHHYSAVFDSLEAGFPMQGRARALVERVFLGPRIVGSLARIYRTGEEKERGSWGEWLGAAGFRRVPMSFANHCQAKLLIGLFNDGYRVEEFGTNNLVLDWKSRRLLSASLWTSSSSDSHQSSLT 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0278 521 ProSiteProfiles GRAS family profile. 103 509 IPR005202 -
Aed10g0278 521 Pfam GRAS domain family 112 509 IPR005202 -
Aed10g0278 521 MobiDBLite consensus disorder prediction 78 92 - -
Aed10g0278 521 MobiDBLite consensus disorder prediction 71 106 - -
Aed10g0278 521 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 510 IPR005202 -
Aed10g0278 521 PANTHER SCARECROW-LIKE PROTEIN 26 4 510 IPR030028 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0278 Aed-Chr10 2249962 2251527 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0278 80 514 GRAS Transcription Factor Family AT5G41920 35.240 3.11e-57 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aed10g0278 GRAS 1.5e-97 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0278 - - gmx:100787926 837.41