Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0268 ATGGATGGGAAGCCTAACCCGGATTCCTCCTCCTCCACGGACTTCCTCCGCCACGTTCAAGCCGCCTTGAAACGACACCGTCCTCTCGGTACAATGCAGTCCAATTGCATAAGGCCAAGGCGCACGCTACTTCCTCAAAGAAGACCATCAAACACTTCTTCTTCCTCCGATCTCACCAATTCTCAAGAACAACCTTCTTCTTCCAAGAACTCGCTTAACACCCTCGCCCCTTCTCAAAACCTAGAAGATGCTCAGAAGAAACTCCAGTTTTCATCAGTTCGAAGCAACACTGCCTCACAGGATGGAAAGGCCACTGACTTGGACAATTTATCTTCTCACATGAGTTCGCTTGGATTCGCAGAAATGGAGTGGGTTGAAGGCAGCCAAATTGAAGCATCATCATCATCACTCGTATGCAACCAGCAGCCAGGGTGTGACGCGAGTTTGAAATGTGAGATTGGAGTTAGTTCCGTGTTACCGAAGAGAACTGTGGCTACTCAGGATCATTTGCAGCAACTCAGCAGTTTTTTGAGTCAGCCAGCGACGCGGTCTTCGGTTGTGGGACCTTCTTGTGCTACAACTACCTCGGTTCATTCAACTTCGGCGCCCATGCTGAATTCAACAACACGGTATTCTCGTTCGCATCAAGATGGTGGCTCGAGTGTGGCTGCTGAGCCTTTGGGGGAGGTTAATGTTAATCCTCGTCCTATAACTGAAGGGGTTGTGAAATCGGTTGATGTTTCCATAAAAGAAACCAATAGAATGCCAGTTGATCAGGGGGCAGAAGCTGAAGTCCAAGCTTCTGGTTCTTGTATTGATGATGCAGGCTTGTTATCTAAGGAGAGCAATCGATCTAAGGAGCAACATGGGGCAGTGTTGAAAGAATCTGGCAATTCTAAATATACTTCCTGTGATGATGGAAAAGTGAAAGAGGTTGTGGATGTTGCTACTGTACAACCGCAGGCTCCACTTCCCACAACCACAACCACAACCTCATGTTCGGATGTGAAGTTGGAGTCTTCTAAGGTAGAAAAACGAGAAAAGGCTGCAAGTAGTAAAGGTGCATCGGGTGCCCGGAAAAGAACTTATGACCCTGATTTGTTTTTCAAAGTCAACGGCAAGCTTTATCAGCGTCTTGGCAAGATAGGTAGTGGTGGAAGCAGTGAGGTCCACAAAGTGATTTCATCCGACTGTAGGATATATGCACTTAAAAAGATCAAGCTCAAGGGTCGTGATTATGCTACTGCATTTGGCTTTTGTCAAGAGATTGAGTATCTAAATAGGCTGAAGGGAAAGGATAACATCATACAGCTTATAGATTATGAGGTGACTGACAAGGCTTTGCTTGAGGAAGTTATGAAAGGCTCCTTTAGTAATAAAGATGGCCGGGTCAAGGATGATGGATGTATATACATGGTGCTTGAATATGGGGAAATCGATTTGGCTCACATGTTGTCTCAGAAATGGAAGGAACTGGATGGAAACAACCAAACTATAGACGAGAACTGGCTTCGATTTTATTGGCAGCAAATTCTTCTAGCTGTCAACACTATTCACGAGGAACGGATTGTGCACTCAGACTTGAAGCCAGCTAACTTCCTCCTTGTCAAAGGCTCCCTAAAATTGATTGATTTTGGTATAGCCAAAGCAATAATGAGTGACACGACCAACATCCAACGAGATTCACAGGTGGGCACTCTAAGTTACATGTCTCCAGAAGCATTTTTGTGTAATGAGACTGATGCGAATGGGAACATCATAAAGTGTGGTCGACCATCAGATATCTGGTCCCTAGGCTGCATCCTTTATCAAATGGTATATGGGAGAACGCCTTTTTCTGATTACAAGACATTTTGGGCCAAATTCAAAGTTATAACAGATCCAAATCACGAAATTACGTATGAACCAGTTTCAAACCCGTGGCTTTTGGATCTTATGAAGAGGTGTCTAGCATGGGATCGCAATCAAAGGTGGAGAATTCCTGAGCTACTCCAACATCCTTTTCTTGTTCCTCCTGTACCATCTAATTCTCATCCATCTTTGCCCCAAGTTCATAGCTGTAAATTGCTACAACTTATTTCTGAAACTTGTACATATGACCCAGAAGCATCCCAATTCTGTAGTCGGCTCCAACGGCTTCTTAGTGACCCACTTGAGAAAACAACTCACTCACAAAATTCTCGAGATCAACAACTAAAACTGCTGTCCCAAATGTCAGAACTCTGTATTCAGCTGCACGAACGTTTGGCAATTACTGATAAGGGAAGCTAG 2271 0.4456 MDGKPNPDSSSSTDFLRHVQAALKRHRPLGTMQSNCIRPRRTLLPQRRPSNTSSSSDLTNSQEQPSSSKNSLNTLAPSQNLEDAQKKLQFSSVRSNTASQDGKATDLDNLSSHMSSLGFAEMEWVEGSQIEASSSSLVCNQQPGCDASLKCEIGVSSVLPKRTVATQDHLQQLSSFLSQPATRSSVVGPSCATTTSVHSTSAPMLNSTTRYSRSHQDGGSSVAAEPLGEVNVNPRPITEGVVKSVDVSIKETNRMPVDQGAEAEVQASGSCIDDAGLLSKESNRSKEQHGAVLKESGNSKYTSCDDGKVKEVVDVATVQPQAPLPTTTTTTSCSDVKLESSKVEKREKAASSKGASGARKRTYDPDLFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCRIYALKKIKLKGRDYATAFGFCQEIEYLNRLKGKDNIIQLIDYEVTDKALLEEVMKGSFSNKDGRVKDDGCIYMVLEYGEIDLAHMLSQKWKELDGNNQTIDENWLRFYWQQILLAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRDSQVGTLSYMSPEAFLCNETDANGNIIKCGRPSDIWSLGCILYQMVYGRTPFSDYKTFWAKFKVITDPNHEITYEPVSNPWLLDLMKRCLAWDRNQRWRIPELLQHPFLVPPVPSNSHPSLPQVHSCKLLQLISETCTYDPEASQFCSRLQRLLSDPLEKTTHSQNSRDQQLKLLSQMSELCIQLHERLAITDKGS 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0268 756 MobiDBLite consensus disorder prediction 279 293 - -
Aed10g0268 756 MobiDBLite consensus disorder prediction 279 303 - -
Aed10g0268 756 PANTHER DUAL SPECIFICITY PROTEIN KINASE TTK 8 726 IPR027084 GO:0004712|GO:0007093|GO:0051304
Aed10g0268 756 Pfam Protein kinase domain 376 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0268 756 PANTHER MIXED LINEAGE PROTEIN KINASE 8 726 - -
Aed10g0268 756 MobiDBLite consensus disorder prediction 90 109 - -
Aed10g0268 756 MobiDBLite consensus disorder prediction 1 17 - -
Aed10g0268 756 Gene3D Transferase(Phosphotransferase) domain 1 490 672 - -
Aed10g0268 756 MobiDBLite consensus disorder prediction 35 75 - -
Aed10g0268 756 MobiDBLite consensus disorder prediction 1 75 - -
Aed10g0268 756 CDD PKc_Mps1 374 669 - -
Aed10g0268 756 ProSiteProfiles Protein kinase domain profile. 376 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0268 756 ProSitePatterns Serine/Threonine protein kinases active-site signature. 523 535 IPR008271 GO:0004672|GO:0006468
Aed10g0268 756 ProSitePatterns Protein kinases ATP-binding region signature. 382 404 IPR017441 GO:0005524
Aed10g0268 756 Gene3D Phosphorylase Kinase; domain 1 369 455 - -
Aed10g0268 756 MobiDBLite consensus disorder prediction 195 219 - -
Aed10g0268 756 MobiDBLite consensus disorder prediction 195 226 - -
Aed10g0268 756 SMART serkin_6 376 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0268 756 SUPERFAMILY Protein kinase-like (PK-like) 370 684 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0268 Aed-Chr10 2185253 2189337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0268 382 670 MAP Kinase Kinase Kinase AT4G08470 29.693 5.84e-25 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Aed10g0268 Pkinase 4.8e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0268 K08866 - gmx:100780144 1246.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0268 10 2185253 2189337 Aed10g0268 10 2185253 2189337 ECH